Brevibacillus sedimenti: IRT44_00045
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Entry
IRT44_00045 CDS
T07711
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ased
Brevibacillus sedimenti
Pathway
ased03420
Nucleotide excision repair
ased03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ased00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IRT44_00045
03430 Mismatch repair
IRT44_00045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ased03400
]
IRT44_00045
Enzymes [BR:
ased01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IRT44_00045
DNA repair and recombination proteins [BR:
ased03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IRT44_00045
MMR (mismatch excision repair)
Other MMR factors
IRT44_00045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_22
AAA_16
AAA_12
Zn_ribbon_4
CoiA
DEAD
ResIII
Gasdermin_C
Motif
Other DBs
NCBI-ProteinID:
UFJ61315
LinkDB
All DBs
Position
7402..9768
Genome browser
AA seq
788 aa
AA seq
DB search
MKIAQLDDQVILLTPETYPRIPAWRLAARQGKVRCPVCGSHLRLMAGISAEPRFLHPADS
DCACKGSDEAVHERLAASPELAAAVAAAADPAPRDANPRQANAATVEEEDGESVRVGSFR
LPKQRTIGGSSVTPAPKPPLFRKRLMPKTRIQHLAEQQNEPLHPRQQQAVTTTDGPLLIL
AGAGSGKTRVMTARTAHLIRDKGVPPRQIMVVTFTTKAADEIRQRLARQLPREQARELIA
GTFHGIFYRMLLYHQPERWDQRRLLKKDWQKWRLLRESGLLASHPELLGQKEQDVLDAFG
VISRWKNEYLLPGQSVPQEAANDAERQAHELYPLYEQAKRTLGWFDFDDMLIGCYEMLRD
DAETLRRYQERITHVMIDEFQDINRIQYETVKLLAAPQNNLCVIGDDDQSIYGFRGSDPQ
YILGFTRDYPQAQTITLEVNYRSRSAIVGLGYSLIGHNRARWKKDCLSFHSEEGETYLFE
PDDEEEQASRIVDEISHRIEQGTPPGECAILYRTSESARPILERLSEAGIPFHYTQEEDS
FYQRQAVRWTLGYLRLAQDPDDAEALREILPTLYISQEMWNAVRSQAILEDLPILHVLPR
LPQWKVYQRKHLQTVTDILAACRECPPAQALELIYEDGRLRDYLKKRAKDRDDGRERWSD
ELQQLLAAARRHATVAEFLHLVERMAEQEKEWRHARPLPKEGVHVLSIHRAKGLEFDHVF
LPDLVEGALPHEYALDAVRKGESSALEEERRLLYVAITRARHSVAVGIPRERFGRKTRPS
RFIAEMGG
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgcgcagctagacgaccaggtcatcctgctaacacccgagacataccctcgc
atccccgcctggcggctggccgctcgccagggaaaagtgcgctgccccgtctgcggttcg
catctccgcctgatggcgggaatcagtgcggaaccccgctttctccatcccgcggacagc
gattgtgcctgcaaaggaagtgacgaggcggtgcacgagcggctggctgccagtcccgag
ctggcggccgctgtcgcagctgcggccgatcccgctccgcgtgatgccaacccgcgtcag
gcgaacgccgccacggtggaagaagaagacggcgaatcggtgcgggtcggctcctttcgc
ctgcccaaacagcggacgatcggcggcagcagcgtgacgcccgcgccaaaaccgccgctg
tttcgcaaacggctgatgccgaaaacgcgcatccaacacctggcggaacagcagaacgaa
ccgcttcatccccgccagcagcaggctgtcacgaccacggatggcccccttctcatcctg
gcaggggcgggcagcggcaagacgcgcgtgatgacagcccggaccgcccacctgatccgg
gacaaaggcgtccctccccggcagatcatggtggtcacgtttaccaccaaggcggcggat
gagatccggcagcggctggcccgccagcttccccgcgagcaggcgcgggaactgatcgcc
ggcacgtttcacggcatcttttaccgcatgctgctgtaccaccagccggaacgctgggat
cagcgccgcctgctgaaaaaagattggcaaaagtggcggctgctcagggaaagcggcctg
ctcgccagccatcccgaactcctggggcaaaaggaacaggacgtgctggacgcgtttggc
gtgattagccgctggaaaaacgaatacctgctgcccggccagtccgtcccgcaggaagcg
gcaaacgacgcggagcggcaggcacacgagctgtacccgctgtacgaacaggcgaagcgg
acgctcggctggtttgactttgacgacatgttgatcggctgttacgaaatgctgcgggac
gatgcggagaccctgcgccgctatcaggagcggatcacgcatgtgatgatcgacgagttt
caagacatcaaccgcatccagtacgaaaccgtcaagctgctcgcagcgccgcaaaacaat
ctgtgcgtcatcggggacgacgatcagtcgatctacggatttcgcggcagcgatccgcag
tacatacttggttttacccgcgattatccccaggcccaaacgattacgctggaagtgaac
taccgctcccgctccgccatcgtcgggctgggctactcattgatcggccataaccgggcg
cgctggaaaaaagactgcctgtcgtttcacagcgaggaaggggaaacctatctgtttgag
ccggacgacgaggaagaacaggcctcccggatcgtcgacgaaatcagccaccggatcgag
caggggacccctcccggcgaatgcgccatcctctaccgcaccagcgagtcggcccgaccg
atcctggagcggctgagcgaagcgggcattccgtttcactacacgcaggaggaggactcc
ttttaccagcggcaggctgtacgctggacgctgggctatttgcggctggcgcaggacccg
gacgatgcagaagcgctgagggagattctccccaccctctacatctcccaggagatgtgg
aacgcggtgcgcagccaggccatactggaagatctgccgatcctgcacgtgctgcctcgc
ctgccgcagtggaaagtctaccagcgcaaacacttgcaaaccgtgaccgacatcctcgcc
gcctgccgggaatgcccgcccgcccaggcgctggagctgatctacgaggacggccggctg
cgggattatctgaaaaagcgggccaaagaccgggacgacggcagggagcgctggagcgac
gaactgcagcagctcttggccgcagccaggcggcacgctaccgtcgccgagtttttgcac
cttgtggaacgcatggcagaacaggaaaaggagtggcgccatgcgcggccactcccaaag
gaaggtgttcacgtgctcagcattcatcgggccaaaggactggaatttgaccacgtgttc
ctgcccgatctggtggaaggcgctctccctcacgagtacgcgctggacgccgtgcgcaag
ggagaatcgtccgcgctggaggaagagcggcggctcctatacgtggcgatcacgcgtgcc
cgccattcggtcgcggtcggcatcccccgcgaacggttcggccggaaaaccaggccctcc
cgcttcatcgccgaaatgggcggatag
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