Brevibacillus sedimenti: IRT44_02830
Help
Entry
IRT44_02830 CDS
T07711
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ased
Brevibacillus sedimenti
Brite
KEGG Orthology (KO) [BR:
ased00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ased03400
]
IRT44_02830 (addB)
Enzymes [BR:
ased01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IRT44_02830 (addB)
DNA repair and recombination proteins [BR:
ased03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
IRT44_02830 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
UFJ61803
LinkDB
All DBs
Position
complement(583990..587538)
Genome browser
AA seq
1182 aa
AA seq
DB search
MAVQFVLGRAGTGKTRTILERISRRLQDDPLGSPIILLVPEQASFQAEQTLATLSGLGGV
IGTQVLSFGRLAHRLQQELGDLTLMQVDDLGKHMVLRLMLERYKDQLQVFGRSALQPGFA
AQLGRLISECKSYGVTFEHTENLEWGSATLNQKIHDLRLIMGAYEAYLAEGYCDADDILN
RVAAKVSESAYIRQAEVYFDGFSGFTNQELRLIEQMMIHAKRVTIALCLDPAERDASLDE
LGLFHPTLRTYRALETMAREAGVAVEQPVLLTEPVRFAHSPWLKQLEARYFEWGDPEAPP
APARADEVVLLSAANRRAEVEAVALQILALARDEGYRWRDMAILLREIGTYADEVATVFT
DYGIPFFLDKKRTVMHHPLVELVRSALEVIAGKWRYEAVFRCFKTDLISPEPQAEEGAGA
EAGTDAEKAGTDAEEAVRRQIDALENYVLAHGVYGSHWAQEAPWRFGGPAGADEDAEADG
LRRRYAAPLLRFEAELKRAEKENVREMTAALYRFLTALDVPEKLESWQRTAEEAGDLEEA
QVHGQVWNGLMNLLDQVVEVMGDEQMEIAMYARVLDSGLESIELGLVPPALDQVLVGSME
RSRQPDVKALFLLGVNEGVIPLKPKEEGILDEAERERLAELGVELAPSARQRLMAEPFLL
YQAMTRPSLRLALSCALADEEGKALLPSSVFSRVKEVLPEAPHRFFHNEPTGEAEADAFL
LGNPRRLFRHLLTLLRGMKKSSALPVFWWEVYDWFIRCSPDAKREGWLLSGLRYTNRAAP
LDGKTSRALYGERLRMSVSRLERFQSCPFSHFSSHGLRLGERRLYKLERFDVGELFHASL
KRAVEKMNEEHLEWGRLTEADSMQLASAVVDELVPATRSSILTRTARYRFLSGKLKRAVG
RAIYVLGEHAKRSRFAPVGLEVAFGPGGDLPGLALKLANGAEMLLVGRIDRVDQSLDDEV
PYLRVIDYKSGPKQLQLSDVWNGLNLQLLVYLDVVVSNAEAWLGKKAEPAGVFYYQVADP
FVTAKRLLTPDEAARERAKKLRMKGLMLADPELARMMDAYVEQGPSELLPFELKKDGTLS
ARSSVATPEQFQALQQYVRETVEAIGQRMIDGEIQIAPYVQGTVSACQFCAYKPVCQFDA
ESAGEMRQLPKWNNKQVWSMLAGPQQTGKGGNDDVTAASGQA
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggcggtccaatttgtcctgggccgggcgggaaccggaaagacgcggacgattctggag
cggatcagccggcgtttgcaggatgatccgctgggctcgccgatcatcttgctggtgcct
gagcaggccagttttcaggcggagcagacactggccaccctgtccgggctgggcggcgtg
attggcacgcaggttctcagctttggccggttggcccaccgcctgcagcaggaactgggc
gatttgacgctgatgcaggtggacgacctgggcaagcacatggtgctgcgcctgatgctg
gaacggtacaaggatcagctgcaggtgtttggccgttccgccctgcagcccggttttgcg
gcgcagttgggacggctgatcagcgagtgcaagtcgtacggggtaacctttgaacatacg
gaaaatctggagtgggggagcgctacactcaaccagaagatacatgacctgcgcctgatc
atgggtgcgtacgaagcctacctggctgaagggtactgcgatgccgacgacattctcaac
cgcgtggcggcaaaggtgagcgaatcggcctacatccgccaagcggaggtgtattttgac
ggcttcagcgggtttaccaatcaggagctgcggctgatcgaacagatgatgatccatgcc
aagcgggtgacgatcgctctctgtctcgatccggccgagcgggatgcgtccctggatgaa
ctgggcctgtttcatcccacgctgcggacgtaccgggcgctggagacgatggcgcgagaa
gcgggtgtcgccgtggagcagcccgtcctgttgacggaacctgtccgctttgctcacagt
ccgtggctcaagcagcttgaagcccgctactttgaatggggcgatccggaagcgccgccc
gcccctgcccgtgcggacgaagtggtgctgctctctgccgccaaccggcgtgccgaagtg
gaggcggtggcactgcaaatcctcgcgctggctcgggacgaaggatatcgttggcgggac
atggccatcctgctccgggagatcgggacgtatgccgatgaggtggccaccgtctttacc
gattacggcatcccctttttcctggacaagaagcggactgtgatgcaccacccgctggtg
gaactggtccgctccgccttggaggtaatcgccgggaagtggcggtacgaggcggtattt
cgctgtttcaagaccgacctgatcagtccggagccgcaagcggaagaaggggcaggcgca
gaagcagggacggatgcagaaaaagcagggacggacgcagaagaagcagtgcggcgccag
attgacgcattggaaaattacgtgttggcgcacggtgtatacggctcccactgggcacag
gaggccccctggcgcttcggcggaccggcgggggcggacgaagacgccgaggcagacggc
ctgcggcgccgttacgctgcaccgctgctgcggtttgaggcggagctgaagcgggcggaa
aaggagaacgtgcgggagatgacggctgccctgtatcgctttctcaccgcgttggacgtt
ccagagaagctggagagttggcagcggacggcggaagaggctggtgatctggaggaagcc
caggtgcacggccaggtctggaacggcctgatgaacctgctggaccaggtggtggaggtg
atgggcgacgagcagatggagatcgccatgtacgcccgcgtcctcgacagcggcctggaa
agcattgaactggggctggtgccgcctgcgctggatcaggtgctggtcgggtcgatggag
cgatcccgccagccggacgtcaaggcgctgtttctgctcggcgtcaacgagggcgtgatc
ccgctcaagccgaaggaagaaggcatcctggacgaggcggagcgggagcggctggccgag
ctgggggtggaattggcgccaagcgcaagacagcggctgatggccgaaccgttcctgctg
tatcaggcgatgacgcgcccctccctgcgtctggcgctgagctgcgccctggctgacgag
gagggcaaggcgctgctgccgtcatctgtcttttcgcgcgtgaaagaggtgcttcccgag
gcgcctcaccgctttttccacaacgagccgaccggggaggcggaggcggacgcctttttg
ctcggcaacccgcgccgcctgtttcgccatctgctgacgcttttgcggggtatgaaaaag
agcagcgccctgcctgtcttttggtgggaagtatacgactggtttatccgctgctcgccc
gatgcaaaacgggaaggctggctgctttccggcctgcgttacaccaaccgggcggcgccg
ctcgacggtaagaccagccgggcgctgtacggcgagcggctgagaatgagcgtctcccgc
ctggagcgcttccagtcctgtccgttttcccacttttcctcgcacggcctgcgcttgggc
gagcggcggctgtacaagctggagcggtttgacgtgggtgagttgttccacgcctcgctg
aagcgggccgtagaaaagatgaacgaagaacacctggagtggggacggctgactgaggcc
gacagcatgcaactcgccagcgcggtggtggacgagctggtgccggcgacgcggagcagc
atcctgacccggacggcgcggtaccgcttcctctccggcaaactgaagcgtgccgtgggc
cgggcgatctacgtgctgggagaacacgccaagcgcagccggtttgctccggtgggactg
gaggtggcgttcgggccgggcggtgacctgccgggactggcgctgaagctggcaaacggg
gcggaaatgctgctcgtcggacgcatcgaccgcgtggaccagtcactggatgacgaagtg
ccgtatctgcgcgtgatcgactacaagtccggccccaagcagctccagctctccgacgtg
tggaacgggctcaatctgcagctgctggtctacctggacgtcgtggtgtccaacgcggag
gcctggctggggaaaaaggcggaaccggcgggggtcttttactaccaggtggctgatccg
ttcgtcactgccaagcggctgctgacgcccgacgaggctgcccgggagcgggcaaaaaag
ctgcgcatgaaggggctgatgctggccgacccggaacttgcacggatgatggatgcttac
gtggagcaggggccgtcggaactgctgccgtttgaactgaaaaaggacggcaccctctcg
gcgcgttcatccgttgccacgccggagcagttccaggcgctgcagcagtacgtgcgggag
acggtggaagcgattgggcagcgcatgatcgacggcgagatccagatcgccccgtatgta
caggggaccgtgtccgcctgccagttttgcgcgtacaaaccggtctgccagtttgacgcg
gaatccgccggggaaatgcgccaactccccaaatggaacaacaaacaggtgtggagcatg
ctggccggcccacagcaaacgggtaaaggaggaaacgacgatgtcacagcagcaagtggc
caagcctga
DBGET
integrated database retrieval system
