Brevibacillus sedimenti: IRT44_03480
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Entry
IRT44_03480 CDS
T07711
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
ased
Brevibacillus sedimenti
Pathway
ased03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ased00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IRT44_03480 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ased03400
]
IRT44_03480 (uvrB)
DNA repair and recombination proteins [BR:
ased03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IRT44_03480 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IRT44_03480 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_16
Arg_repressor_C
DUF87
AAA
TrwB_AAD_bind
HerA_C
AAA_5
AAA_25
HAD_Pex22
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UFJ61908
LinkDB
All DBs
Position
complement(729711..731687)
Genome browser
AA seq
658 aa
AA seq
DB search
MDRFELVSEYQPSGDQPTAIAQLVEGVKAGKRHQTLLGATGTGKTYTAAQVIAQVNKPTL
VIAHNKTLAAQLCAEFKEFFPHNAVEYFVSYYDYYQPEAYIPQTDTYIEKDSSINDEIDK
LRHSATSALFERRDVIIVASVSCIYGLGSPEEYRELVLSLRVGMEKSRDEVLHRLVDIQY
DRNDINFVRGTFRVRGDVVEIFPASHGEHAIRVEFFGDEIERITEIDVVTGEIIGQRDHV
AIFPASHYVTRDEKMKRAIQSIGAELEERLAELRAAGKLLEAQRLEQRTRYDMEMLAEMG
FCSGIENYSRHLTGLPPGHPPYTLLDYFPKDFLVIIDESHMTLPQIRGMYNGDRARKDVL
VEHGFRLPSARDNRPLTFEEFESKVNQAIYISATPGPYELEHCPVLVQQVIRPTGLVDPT
ISVRPIKGQIDDLIGEIRATIAKDERVLVTTLTKKMAEDLTDYLKEIGIKVRYLHSDIKT
IERMQILRSLRLGEFDVLIGINLLREGLDLPEVSLVAILDADKEGFLRNERSLIQTIGRA
ARNAEGRVIMYADRITDSMAAAIRETERRRSIQIAYNEKHGITPQTVKKAIREVIEATRV
AEEKAEYLPHADFKKMPKKDRLAVIERMEEEMKEAARNLMFERAAELRDLILELKAEL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggaccgttttgaattggtatcggagtatcagccgtccggtgaccagccaaccgccatt
gcccaactggtggagggcgtaaaagcgggcaagcgtcaccagacgctgctgggggcgacc
ggtacgggaaaaacctatacggcggcgcaggtgatcgcccaggtgaacaaaccgacgctg
gtgatcgcccacaataagaccttggctgcacagttgtgcgccgagttcaaggagtttttc
ccccataacgccgtcgaatacttcgtcagctactacgactactaccaaccggaagcgtac
attccccaaacagatacctatattgaaaaagactccagcatcaacgacgagatcgacaag
ctgcgccactcggccaccagcgccttgttcgagcggcgggacgtgatcatcgtcgcgtcc
gtctcgtgcatttacgggttgggttctccggaagagtaccgggagcttgtgctgtcgctg
cgcgtcgggatggagaaaagccgggacgaggtgctgcaccggctggtggacatccagtac
gaccgcaacgacatcaacttcgtccgcgggaccttccgcgtccgcggcgacgtcgtggag
attttccccgcgtcccacggcgaacatgcgatccgcgtggagtttttcggagacgaaatc
gaacggatcacggagattgacgtggtgaccggagagattatcggccagcgcgaccacgtc
gccatctttccggcatcccactacgtgacccgcgacgagaaaatgaagcgggccatccag
agcattggagcggagctggaagagcggctggccgaactgcgcgccgcaggcaagctgctg
gaggcgcagcgcctggagcagcgcacccgctacgacatggaaatgctggcggagatgggc
ttctgctccggcatcgaaaactactcccgccacctgacggggctgccgccgggacatccg
ccatacacgctgctcgactatttccccaaggacttcctcgtcatcatcgacgagtcgcac
atgaccctgccgcagattcgcgggatgtacaacggggaccgggcgcgcaaggacgtcctg
gtcgaacacggcttccgtctgccgtcggcgcgggacaaccgtccgctcaccttcgaagag
tttgagtcaaaggtgaatcaggccatctacatttctgccacgcctggcccgtatgagctg
gagcactgcccggtcctggtgcagcaggtgattcgtcccaccggcctggttgacccgacc
atttccgtgcggccgatcaaggggcagatcgacgacctgatcggcgagatccgggccacg
atcgccaaggatgagcgcgtgctggtcacgacgctgacgaaaaagatggccgaggactta
accgactatctgaaggaaatcgggatcaaagtacgctacctgcactccgacatcaagacg
atcgagcggatgcagatattgcgctccctgcgacttggggaatttgacgtgctgatcggg
atcaacctcctgcgggaggggcttgaccttcccgaagtgtcgctggtggcgattctcgac
gcggacaaggaaggcttcctccgcaacgaacgctcgctgatccagacgatcggccgggcg
gcccgcaacgccgagggacgcgtcatcatgtacgccgaccggatcaccgactccatggcg
gcagccatccgggagacggagcggcgccgttccatccagatcgcgtacaatgaaaagcac
ggcattacgccgcagaccgtgaagaaagccatccgcgaagtgatcgaggcgacgcgggtg
gcagaagaaaaagcggaatacctgccgcatgcagacttcaagaagatgccgaagaaagac
cgcctggccgtgattgaacggatggaagaagaaatgaaggaagcagcacgaaatctgatg
tttgaacgcgcggccgaactgcgagacttgatactggagctgaaggcagagctctaa
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