Brevibacillus sedimenti: IRT44_04405
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Entry
IRT44_04405 CDS
T07711
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K21464
penicillin-binding protein 2D [EC:
2.4.99.28
3.4.16.4
]
Organism
ased
Brevibacillus sedimenti
Pathway
ased00550
Peptidoglycan biosynthesis
ased01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ased00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IRT44_04405
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ased01003
]
IRT44_04405
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ased01011
]
IRT44_04405
Enzymes [BR:
ased01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
IRT44_04405
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
IRT44_04405
Glycosyltransferases [BR:
ased01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
IRT44_04405
Peptidoglycan biosynthesis and degradation proteins [BR:
ased01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
IRT44_04405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Cas6_N
Motif
Other DBs
NCBI-ProteinID:
UFJ62073
LinkDB
All DBs
Position
938070..940121
Genome browser
AA seq
683 aa
AA seq
DB search
MEVIREAPLLRYLRWAKKFIKLFILSLLCCSFAALLLILYLRSQPLPAVSINQTTTIYAS
NGEVLDTLHRGQNRFVVPLKDISPFLVQATIAIEDRSFHKHYGIDWLRLARAAYVDVIHM
EKRQGASTITQQLARNLYLSMDKTWERKIKEALLAIQLELNYSKDEILEMYMNQIYYGHS
AYGAQAAAQTYFGKDAKDLTLAESALLAGIPKGPSYYSPYVDFDKAKSRQQVILQAMVRS
GYITPEQAEQAYAEPIKLKERNTEAAAEQAPYFRDYIANLVKNKYGIDEETFIHGGLKIH
TTLDPVMQKKAEDIIAKVLPKDKPDLQVALVAMDPATGHIKAMVGGRDYTKSQYNRALSM
RQPGSAFKPILYLAALQNGFTPLTQMKSEPTVFTYDNGKTYIPKNFGERYAHAYINMREA
IKTSDNIYAVKTIDHLTPQKVVDQARELGITSKLQAVPSLALGTSLVSPLELNTAYVTIA
NKGERVKPIAITRIEDSQGNVLVEEKPEKTRVADPVASALLINLMQSVFEPGGTGHRVAG
ELNRPVAGKTGSTDYDAWLSGFTPQLVTTVWVGYDKNQKVDDVTEGYLSKKIWAQFMESA
LKDQPPALFDMPAGVVSVYIDPASGKLATEHCPNPQLFYFAKGTEPQEYCTDHLPNHETP
TPLPPPDTPSFWQRMGSWWKPTE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaatccgggaagccccgctcctccgctatctgcgttgggcgaagaaattcata
aaattattcatactcagcctattgtgctgttcgtttgccgccctgctgctgattctctac
ctccgttcacagccgctgccggcagtctcgatcaatcagacgacgaccatttacgccagc
aacggtgaggtgctggatacgctgcaccgcggccagaaccggtttgtcgtcccgctgaag
gacatctcccctttcctggtgcaggcgacgatcgccatcgaagaccgttccttccacaag
cactacggcatcgactggctgcgtctggctcgggccgcctacgtggacgtgatccacatg
gaaaagcggcagggagccagcacgatcacgcagcaattggcgcgaaacctgtatctctcg
atggacaagacctgggagcgcaagataaaggaagcgctgttggccatccagttggaacta
aattacagtaaggacgaaatcctggagatgtacatgaaccagatctactacggccattcc
gcttacggcgcccaggccgccgcgcaaacgtacttcggcaaagacgccaaggatctgacg
ctggcagaaagcgccttgttggccggcatccccaaagggccgtcgtactactctccctac
gtggactttgacaaggccaaatcgcggcagcaggtgattctccaggccatggtccgctcc
ggctacattacgccggaacaggcggagcaggcgtatgccgaaccgatcaagctaaaggag
cgcaacaccgaagccgcggctgaacaagccccttattttcgcgattacattgccaacctg
gtgaagaacaaatacggcatcgacgaagagacctttatccacggaggactgaaaatccac
acgaccctggacccggtgatgcagaaaaaagcggaagacatcatcgccaaagtgctgccg
aaagacaaacccgatctgcaggtggcgctggttgccatggacccggccaccggccacatc
aaggcgatggtgggcggacgtgactacaccaaaagccagtacaaccgggcattgagcatg
cggcagccgggctctgcgttcaagccgatcttgtacctggccgccctgcaaaacggcttt
acgccgctgacgcagatgaaaagcgaaccgaccgtgttcacctacgacaacggcaagacc
tacatcccgaaaaactttggggagcgctatgcccatgcctatatcaacatgcgggaggcg
atcaagacttcggacaacatctacgcggtcaagacaatcgaccatctcaccccgcaaaaa
gtggtggatcaggcccgcgagctggggatcaccagcaagctgcaggctgtaccctcgctg
gccctgggcacgtcgctcgtctccccgcttgaattgaacaccgcctacgtcaccatcgcc
aacaaaggggagcgggtgaagcccattgccatcacgcggattgaggacagccagggaaac
gtgctcgtcgaggaaaaaccggagaaaaccagagtggccgatccggtggcctcggcactg
ctgatcaatctgatgcagagcgtgtttgaaccgggcggcacaggccaccgggtggcgggc
gaattgaacaggcccgtcgcaggcaaaaccggctccaccgattacgacgcctggctcagc
ggatttacgccgcagttggtcaccaccgtctgggtgggatacgacaaaaaccaaaaagtg
gacgatgtcaccgaaggctacctctccaaaaaaatctgggcgcagttcatggaaagtgcg
ctgaaagaccagcctcccgccttgtttgacatgccggcaggggtggtgtcggtgtacatc
gatccggcatcgggcaagctggcgacggagcactgccccaacccgcagttgttctacttt
gccaaaggtaccgagccgcaggagtactgcaccgatcacctccccaaccatgaaacgccc
acgccgctcccgcctccggacaccccgtcgttctggcagcgcatgggcagttggtggaaa
ccgaccgagtag
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