Brevibacillus sedimenti: IRT44_10465
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Entry
IRT44_10465 CDS
T07711
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ased
Brevibacillus sedimenti
Pathway
ased03030
DNA replication
ased03410
Base excision repair
ased03420
Nucleotide excision repair
ased03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ased00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IRT44_10465 (polA)
03410 Base excision repair
IRT44_10465 (polA)
03420 Nucleotide excision repair
IRT44_10465 (polA)
03440 Homologous recombination
IRT44_10465 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ased03032
]
IRT44_10465 (polA)
03400 DNA repair and recombination proteins [BR:
ased03400
]
IRT44_10465 (polA)
Enzymes [BR:
ased01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IRT44_10465 (polA)
DNA replication proteins [BR:
ased03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IRT44_10465 (polA)
DNA repair and recombination proteins [BR:
ased03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IRT44_10465 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IRT44_10465 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UFJ63079
LinkDB
All DBs
Position
2138830..2141481
Genome browser
AA seq
883 aa
AA seq
DB search
MSHFVLIDGNSIANRAFYALPLLSTSAGLHTNAVLGFTTMLLKVLEEMQPTHMLVAFDAS
KVVFRHSEFAEYKGGRAKTPPELSEQFPLIRELLDAFSIRRFELEGYEADDIIGTLTRRA
DESGWKTTVITGDKDMLQLVSDNVSVALTRKGVSEMELYTPKEIADKYGLQPLQIIDLKG
LMGDASDNIPGVPGVGEKTALKLLREYGSVEAVLENIDRISGKKLQENLRENVEQARMSK
ALATIMRDAPVDLDVEQTVYSGYDAAAVTEFFKKMEFKSLLSKVKTAAPKDGGQSGQERA
PFSFEVVEGGRTDSYAEKLTSPMALYVEMDGDNYHHAPILGFGLAADGISFYVPYDVAVE
WQAFREWLADDTKEKWVFDGKRDTVGLSWHGMEAAGIGFDVYLASYLLNATESNPTLDGV
AAQYAEVGVLPDDEVFGKGAKRQVPETSVLSEHVARKAAAIWQSVPKLRDELAQHKLNEL
LTDLEAPLSLVLAAMEKQGVKINRERLLEMGEELDSQLETLTAKIHELAGTPFNINSPKQ
LGEILYDKLDLPVLKKTKTGPSTSADVLEKLAPYHPIIGEILHFRQLGKLRSTYIEGLTK
EIHAKTGKIHTRFNQATTATGRLSSTEPNLQNIPIRLEEGRKIREAFIPSEAGWYMLAAD
YSQIELRVLAHISGDENLIDAFRKGMDIHTRTAMDVFGVSEAEVTPLMRRQAKAVNFGIV
YGISDYGLSQNLNITRKEAADFIERYFAVFSGVKRYMEEIVKQAKQDGYVTTLLHRRRYL
PDIKSSNFNLRSFAERTAMNTPIQGTAADIIKLAMIRMQESIREKGLKSRMLLQVHDELV
FEVPEAELAVMQKLVPDVMENALKLDVPLKVDVHYGRTWYDAK
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
ttgagccactttgtgttgattgacgggaacagcatcgccaaccgggcgttttacgcgctc
ccgctgctgtccacgtcggcgggactgcataccaacgcggtgcttggcttcaccaccatg
ctgctcaaggtgctggaagagatgcagccgacgcacatgctggtcgcgtttgacgcgagc
aaagtcgtgtttcgccacagcgagtttgccgaatacaagggcggcagggccaagacgccg
ccggagctgtcggagcagtttccgctgattcgcgagctgctggacgcattttccatccgg
cgctttgaactggaaggatacgaagcggatgacatcatcgggacgctcacccggcgggcg
gacgaatcgggctggaagacgacggtgattaccggggacaaggacatgctccagctggtc
tccgacaatgtatccgtagcgttgacgcgcaagggcgtaagtgagatggagctgtatacg
cccaaggagatcgcggacaagtacgggttgcagccgcttcagatcatcgacctgaagggg
ctgatgggcgatgcctcggacaacatcccgggcgtgcccggcgtgggggaaaagactgcg
ctgaagcttttgcgcgaatacggatcggtggaagcggtgctggagaacatcgaccggatc
tccggcaaaaagctgcaggaaaacctgcgtgaaaacgtggagcaggccaggatgagcaag
gcgctggcgaccatcatgcgggacgcccccgtcgatctggacgtggaacagacggtgtat
tccggctacgatgcggcggctgtcaccgagtttttcaaaaaaatggagttcaagtcgctg
ctgtccaaggtaaagacggccgccccgaaagatgggggccagtcgggacaagagcgcgcg
ccgttttccttcgaggtagtggagggcggcagaacagacagctatgccgaaaaactgacg
tcgcccatggcgctgtacgtggagatggacggagacaactaccaccatgcgccgatcctc
ggcttcggtctggccgcagacggcatctcgttctacgtgccgtacgacgtggccgtggag
tggcaggcatttcgcgaatggctggccgacgacaccaaggaaaaatgggtgtttgacggc
aagcgggacacggtgggactgtcctggcacggcatggaggcagccggcatcggctttgac
gtctacctggcctcctacctgctgaatgcgacggagagcaatcccaccctcgacggtgtc
gcggcccagtacgccgaggtaggcgtgctgccggacgatgaggtgtttggcaaaggagcc
aagcggcaggtgccggagacgagcgtcctcagcgaacacgtggcgcgcaaagcggctgcg
atctggcagagcgtgccaaaactgcgggatgagctggcgcagcacaagctgaacgaactg
ctcaccgatctggaagcgccgctcagtctggtcctggccgcgatggaaaagcagggagtc
aaaatcaaccgcgagcggctgttggagatgggcgaagagctggacagccagttggagacg
ttgacggcaaagattcacgagctggccgggacgccgttcaacatcaattcgccaaagcag
ttgggggagatcctgtacgacaaactggatctgccggtgctgaagaagacgaagaccggc
ccgtccaccagtgccgacgtattggaaaagctggcgccgtaccatccgatcatcggggaa
attctccacttccgccagttgggcaagttgcgctccacgtacatcgaggggctgaccaag
gagattcacgccaagacgggcaagattcacacgcggttcaaccaggccaccacggcgacc
ggccgcctgtccagcaccgagcccaacctgcaaaacattcccatccgcctggaggaaggc
cggaaaatccgcgaggcgttcattccttccgaagcaggttggtacatgctggctgccgac
tactcgcagatcgaactgcgcgttctcgcccacatctccggggatgaaaacctgattgac
gccttccgcaaggggatggacattcacacgcggacggcgatggacgtgtttggggtgagc
gaggcggaggtcacgccgctgatgcgccgtcaggccaaggcggtcaacttcggcatcgtc
tacgggatcagcgactacggcttgtcgcaaaacctgaacatcacgcgcaaggaagcagcg
gacttcatcgaacgctacttcgccgtcttttccggcgtgaaacggtacatggaagagatc
gtgaagcaagcgaagcaggacggctacgtcaccacgctcctgcaccgacgccgctacctg
ccggacatcaagagcagcaatttcaatttgcgctcgtttgcggagcggacggccatgaac
accccaatccagggaacggccgccgacatcatcaaactggcgatgatccggatgcaagag
agcatccgtgaaaaaggcctgaagagccggatgcttctgcaggtgcacgacgaactggtc
ttcgaagtgccggaagcggaattggccgtcatgcagaagctggtgccggacgtgatggaa
aacgcgctcaagttggacgtgccgctgaaagtggacgtgcattacggacgcacctggtac
gacgcgaagtaa
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