Brevibacillus sedimenti: IRT44_10560
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Entry
IRT44_10560 CDS
T07711
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ased
Brevibacillus sedimenti
Pathway
ased03420
Nucleotide excision repair
ased03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ased00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IRT44_10560
03430 Mismatch repair
IRT44_10560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ased03400
]
IRT44_10560
Enzymes [BR:
ased01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IRT44_10560
DNA repair and recombination proteins [BR:
ased03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IRT44_10560
MMR (mismatch excision repair)
Other MMR factors
IRT44_10560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
PhoH
SLFN-g3_helicase
AAA_30
DEAD
AAA_16
IKBKB_SDD
ResIII
NACHT
PhoU_div
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UFJ59776
LinkDB
All DBs
Position
2158184..2160535
Genome browser
AA seq
783 aa
AA seq
DB search
MSVTEREWREEKERVERVIGVIDRKINSLEEHVSNVRADIVEIRKNFWDDVTVNVDDMME
AIETYASIKQQAEVLSERERSHRHASRQLATLKKLKQSPYFGRIDFVEDGEQTPERIYLG
IASLLDEQDEQFLIYDWRAPVSSLYYDYPPGPAQYETPGGTITGTMELKRQYIIRDGRIQ
SMFDTGVTIGDELLQEVLGRQADGQMKSIVATIQKEQNRIIRNERSRLLVVQGAAGSGKT
SAALQRVAYLLYRYRNTLRAEQIVLFSPNPLFNSYVSTVLPELGEENMQQTTFQEYVEHR
LGETFRIEDPFAQMEYAYTAMDEPGYDARMEGIRFKASAAFKQVIERYVESLRQAGLLFA
DVTFRGRTLIVAEQIREHFYSLDPSLRLPNRLRLTAEWLLEELRKQERQERTQPWVEDEI
DLLDREAYYRAYQQLRREKRFTAESFDDFERERELLAATVVNEHFEPLRRWVKQFGFVNM
KAVYRQLFADPQYAMRLANDLPWPQQWAEICARTVEMLDRSELFWEDATPYLYAKELIEG
FHTNTSVRHVFIDEAQDYSPFQFAFLRRLFPHSSMTVLGDLNQAIYAHVDAQTDFSPLAS
LYEDGQTEMIVLTRSYRSTLQIVEFTRGLIAGGEVIQPFNRDGVKPTLTQAADPSDLAEK
IVARIRALQDAGHRTIAVICKTARESRDAYAALSSRLPVRLISKETVSFEPGVLVIPSYL
AKGVEFDAVIIYDASRVTYGREAERRLFYTACTRAMHELHLYAVGEVSPFVTALSPDTYV
TER
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgacggagagagagtggcgggaagaaaaagaacgtgttgaacgtgtcatcggc
gtgattgaccggaaaatcaacagtcttgaggagcatgtcagcaacgtgcgggcggacatc
gtggagatccgtaaaaacttttgggacgatgtgacggtcaacgttgacgatatgatggaa
gcgatagagacgtacgcgagcatcaagcagcaggctgaggtattgtcggagcgggaacgc
agccaccgccatgcgagcaggcagcttgccacgctgaagaaactgaaacagtcgccgtat
ttcgggcgaatcgactttgtcgaagacggggagcaaactccggagcgcatctacctggga
atcgcctccctgctcgacgaacaggacgaacagtttctgatctacgattggcgcgcgccg
gtgtccagcctgtattacgactacccgcccggaccagcgcagtacgagactcctggcggt
acgattaccggcacgatggagttgaagcggcagtacatcatccgtgacggccggattcag
agcatgtttgacacgggggtcaccatcggcgacgaactgctgcaggaagtgctcggcaga
caggcggacgggcagatgaaaagcatcgtggccacgattcaaaaagaacaaaaccgcatt
atccgcaacgagcgaagccggctgctcgtcgtacagggagcagcgggaagcggcaagacg
tctgccgctctgcagcgggtggcctatcttctctaccggtaccggaacacgctgcgggcg
gagcagatcgtgctgttttcccccaatccgctgtttaacagctacgtgtccaccgtcctg
cccgaattgggtgaggaaaacatgcagcagacgacgtttcaggagtacgtggagcacagg
ctgggggagacgtttcgcatcgaagatccgtttgcgcagatggaatacgcctacaccgcc
atggacgagccggggtatgacgcccgcatggaaggcattcgcttcaaggcgtctgccgcc
ttcaagcaggtgatcgagcgctacgtggaatcgctccggcaagcggggttgctctttgcg
gatgtgaccttccgcggcaggaccctgattgtcgccgagcaaatccgggagcatttttac
tcgctcgatccctcgctgcgcctccccaaccgcttgaggctgacggcagagtggctgctg
gaagaattgcgaaagcaggagcgccaggagcggacacagccgtgggtggaagacgagatc
gacctgcttgatcgggaggcgtattaccgcgcctatcaacagcttcggcgggaaaagcgc
tttaccgccgagtcgtttgacgactttgagcgcgaacgggaattgcttgccgccacggtc
gtcaacgagcacttcgagccgctgcgccggtgggtgaagcagtttggttttgtcaacatg
aaggccgtgtaccggcagttgtttgccgatccgcagtacgcgatgcgtttagcaaacgat
ctcccctggccgcagcagtgggcggagatatgcgccaggaccgtggagatgctggatcgg
tccgagctgttctgggaggacgccacgccgtatttgtatgcaaaagagttgatcgaaggc
tttcacaccaacacgtcggtccggcacgtgttcatcgatgaggcacaggactactccccg
tttcagtttgcttttctccggcggctgtttccgcacagcagcatgaccgtgctcggcgac
ctgaaccaggcgatttacgcccacgtcgatgcgcaaaccgacttttccccgctcgcatcg
ctgtacgaagacggacagaccgagatgatcgtgctgacgcggagctaccggtccacgctg
cagatcgtcgagtttacccgcgggctgatcgccgggggcgaagtgattcagccgtttaac
cgggacggcgtaaagccaaccttgacacaagctgccgatccgagcgatctggcggaaaag
attgtcgcccgcatccgcgcgcttcaagacgcgggacaccggacgattgcggtcatctgc
aaaaccgcccgggaaagtcgggacgcgtacgcagcactcagcagccggctgccggtgcgc
ctgatcagcaaggagacggtctcctttgagccgggcgtgctcgtcatcccgtcctatctg
gccaaaggcgtcgaattcgacgcggtcatcatctacgatgcgtctcgggtgacgtacggg
cgggaggcggaacgcaggctgttttacactgcctgtacgcgggcgatgcatgaactgcac
ctgtatgctgtcggcgaggtgagcccgtttgtgaccgcgctgtctcccgatacttacgtt
acggagcgctga
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