Aggregatibacter segnis: NCTC10977_00376
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Entry
NCTC10977_00376 CDS
T06075
Symbol
rfaF
Name
(GenBank) ADP-heptose--LPS heptosyltransferase 2
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
aseg
Aggregatibacter segnis
Pathway
aseg00540
Lipopolysaccharide biosynthesis
aseg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aseg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NCTC10977_00376 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
aseg01005
]
NCTC10977_00376 (rfaF)
Enzymes [BR:
aseg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
NCTC10977_00376 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
aseg01005
]
Core region
NCTC10977_00376 (rfaF)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
CREG_beta-barrel
Motif
Other DBs
NCBI-ProteinID:
SQH63879
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All DBs
Position
1:375518..376561
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AA seq
347 aa
AA seq
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MNILIIGPSWVGDMMMSHSLYQQLKLQYPTCLIDVMAPNWCKPLLARMPEVRNAIEMPLG
HGKFALCERYRLGKALRHQYDMAIVLPNSLKSAFIPLFAKIAVRRGWKGESRYFLLNDLR
NNKRDYPMMVQRYVALAFEKNAVPKAADIPVLKPYLTVEPTQQAETLKTFENQTALLGNR
PIIGFCPGAEFGPAKRWPHYHYAKLAEMLIEKGYAVELFGSPKDVEAGEQIRNALPAELQ
PFCLNLAGQTNLNQAVDLIAHCTAIVSNDSGLMHIAAATDRPLVALYGPTSPTYTPPLSD
KAEIIRLIEGDLIKVRKSTDSAEGYHQSLIDITPQSVFEKLTALLNK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcctaattatcggcccctcttgggtcggcgatatgatgatgtcgcacagctta
tatcaacaacttaaactgcaatatccaacttgcctaattgatgtgatggcgccgaactgg
tgtaagccgttgctggcacgcatgccagaagtgcgtaacgccattgaaatgccgctcgga
cacggcaaatttgcgctatgtgaacgttatcgtttaggcaaagcgttacgtcatcagtat
gacatggcgattgttttgccgaactctttaaaatccgcgtttatccctttatttgcgaaa
attgccgtgcgtcgtggttggaaaggggaaagtcgttattttctgctcaatgacttacgt
aacaacaaacgggattacccaatgatggtgcagcgttatgtggcattggcgtttgaaaaa
aatgcggtgccgaaagcggcagatattcctgtcttaaaaccttacttaaccgttgagcca
acacaacaggcagaaaccttaaaaacatttgaaaaccagaccgcacttttaggcaatcgc
ccgattattggtttttgtccgggggccgaatttggcccggcaaaacgttggccgcattat
cattacgcgaaattagcggaaatgctgattgaaaaaggctatgccgtggaattgtttggc
tccccgaaagacgtagaagccggcgaacaaattcgcaatgcattgcctgccgagttgcaa
ccgttttgtttaaatttagcgggacaaactaatctgaatcaggctgtggatttaattgct
cactgcacggcgatcgtgagtaacgacagtggtttaatgcacatcgcggcagctacagat
cgcccattggtggcgctttacggcccaaccagcccaacgtatacgccaccactgtcagat
aaagcggaaatcatccgtttaattgaaggcgatttgattaaagtgcgtaaaagcaccgac
agcgcggaaggatatcatcaaagtttgatcgatattacaccacaaagcgtatttgaaaaa
ctcaccgcattactgaataaatag
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