Aggregatibacter segnis: NCTC10977_00398
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Entry
NCTC10977_00398 CDS
T06075
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
aseg
Aggregatibacter segnis
Brite
KEGG Orthology (KO) [BR:
aseg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aseg03032
]
NCTC10977_00398 (gyrB)
03400 DNA repair and recombination proteins [BR:
aseg03400
]
NCTC10977_00398 (gyrB)
Enzymes [BR:
aseg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NCTC10977_00398 (gyrB)
DNA replication proteins [BR:
aseg03032
]
Prokaryotic type
DNA Topoisomerases
NCTC10977_00398 (gyrB)
DNA repair and recombination proteins [BR:
aseg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC10977_00398 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
SQH63897
LinkDB
All DBs
Position
1:complement(395232..397652)
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AA seq
806 aa
AA seq
DB search
MSTTTPETYGANSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYC
DDIVVTIHSDNSVSVQDDGRGIPVDIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLH
GVGVSVVNALSDKLQLTIRRQGKVHEQFYSLGDPQAPLAVIGETTQTGTTVRFWPSPTIF
TNIEFEYDILAKRLRELSFLNSGVSIRLIDERTDKQDHFHYEGGIQAFVEYINRGKTPIH
PKPFYFSAEKDGIGVEIALQWNDGYAENIYCFTNNIPQRDGGTHLAGFRGAMTRTLNNYM
ENEGYTKKSKVATSGDDAREGLVAVISVKVPDPKFSSQTKDKLVSSEVKSSVESLMNEYL
QTYLLENPNDVKIIVTKIIDAARAREAARKAREMTRRKGALDLGGLPGKLADCQERDPAL
SELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSAEVGTLITALGCG
IGRDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYVYIAQPPLYKV
KKGKQEQYIKDDEAMAEFELAIALENAALYVNENAPGMQGVALQNLASEYLAVQKMTTRL
SRYYPESVLKELIYQPALTTALMQQESAVNSWADSLVASLNGKETDGRHYSYRLQFNAER
NLYEVVLTVRTHGIDTDYFLNFQFVTGNEYARLIALGEKLVGLLEENAYVMRGERKVAVT
SFEQAIEWLMKESRRGLMIQRYKGLGEMNPEQLWETTMDPNTRRMLKVSIKDAVAADQLF
TTLMGDEVEPRREFIESNALRANLDI
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaactactccagaaacttatggtgcaaacagtattaaagtgctgaaagggctt
gatgcggtgcgtaaacgtcccggtatgtatatcggtgacacagacgatggaacaggttta
caccatatggttttcgaggtcgtggataacgctattgacgaagccttggctgggtattgt
gatgacatcgtggtgactattcattccgataattctgtttccgtacaggatgacgggcgc
ggtattccggtagatattcacccggaagaaggtgtttctgccgcagaagtgatcatgacg
gttttgcatgcgggcggtaaatttgacgataactcctataaagtctccggcggtttgcac
ggtgtgggggtatccgtggtaaacgcgttgtccgacaagttacagctcaccattcgccgt
caaggcaaggtgcatgagcaattttacagcctcggcgatccacaagcacctctagccgtt
atcggcgaaaccacccaaaccggtaccaccgtgcgtttctggccaagcccgactatcttc
actaatattgaatttgaatacgatattttagccaagcgtttaagagagttatctttctta
aactccggcgtttctattcgtttaattgacgaacgtaccgacaaacaagaccatttccac
tacgaaggtggtattcaagcgttcgtggaatatatcaatcgtggtaaaacgccaatccac
ccgaaaccgttctatttctctgcagaaaaagacggcattggcgtggaaattgcgttgcaa
tggaacgatggttatgcagaaaacatttactgctttaccaacaacattccacaacgcgat
ggtggtacgcacttggcaggtttccgcggggcgatgacccgtacgttgaataactacatg
gaaaacgaaggctacaccaagaaatccaaagtggcgacttccggtgatgatgctcgtgaa
ggcttggtagctgtgatttccgtgaaagtaccggatccgaaattctcttctcaaaccaaa
gacaaattggtttcctccgaagtaaaaagttcggtggaatctttgatgaacgagtatttg
caaacctatttgttggaaaatccaaacgatgtaaaaatcatcgtgaccaaaattattgat
gcggcacgtgcccgtgaagcggcacgtaaagcgcgcgaaatgactcgtcgtaaaggcgca
ctagacttgggtggcttgccgggtaaattagcggattgtcaggagcgtgatccggcatta
tccgaactttatatcgtagagggtgactctgcgggcggttcggcaaaacaagggcgtaat
cgtaaaaaccaagcaattttgccgttaaaagggaaaatcctgaatgtggaaaaagcccgc
tttgacaaaatgttatcttctgcggaagtggggacattgattacggcgctaggttgcggt
atcggtcgtgacgaatataacccggataaattgcgttatcacagcattattatcatgacc
gatgcggacgtagacggctcgcacattcgtacgttgttattgaccttcttctatcgtcaa
atgccggaactgattgaacgcggttatgtgtatattgcccaaccaccgctttataaagtg
aaaaaaggcaaacaagagcaatacattaaagacgatgaagccatggcggaatttgaattg
gcgattgcattggaaaatgcggcgctttatgtgaatgagaatgcgccgggtatgcagggt
gtggcgttacaaaatctcgcttccgaatatcttgcagtacaaaaaatgacgacccgcttg
agtcgttattatccggaaagcgtgttgaaagaattgatttatcaaccggcgttgaccaca
gcgttaatgcaacaggaaagtgcggtcaattcttgggctgattctttggttgcttcttta
aatggaaaagaaactgacggcagacattatagctatcgtttgcaattcaatgctgaacga
aacttgtatgaagtggtattaacggtaagaacgcacgggattgatacggattatttctta
aacttccagtttgtaaccggtaatgaatatgcgcgtttaattgcattgggtgaaaaattg
gtcggcttattagaagaaaatgcttatgttatgcgtggtgaacgtaaagttgcagtaact
tcttttgagcaagcgattgaatggttaatgaaagaatctcgccgtggtttgatgattcaa
cgctataaagggttaggtgaaatgaacccggaacagctttgggaaacaacaatggatcca
aacactcgccgtatgttgaaagtgtctatcaaagatgcggtggctgcagatcagttattc
accaccttaatgggggatgaagtagagcctcgtcgcgaattcattgaaagtaacgcatta
agagcaaatctggatatttaa
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