Aggregatibacter segnis: NCTC10977_00399
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Entry
NCTC10977_00399 CDS
T06075
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aseg
Aggregatibacter segnis
Pathway
aseg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aseg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10977_00399 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aseg03019
]
NCTC10977_00399 (recQ)
03400 DNA repair and recombination proteins [BR:
aseg03400
]
NCTC10977_00399 (recQ)
Enzymes [BR:
aseg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10977_00399 (recQ)
Messenger RNA biogenesis [BR:
aseg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC10977_00399 (recQ)
DNA repair and recombination proteins [BR:
aseg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC10977_00399 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Hanta_Gn-B
HEM4
Motif
Other DBs
NCBI-ProteinID:
SQH63898
LinkDB
All DBs
Position
1:complement(397749..399638)
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AA seq
629 aa
AA seq
DB search
MNHLTSSEPMKSAVDFLDKSSAKSTALYATAKNVLHSVFGYQAFRKGQEEIIQAALNGQD
CLVIMATGTGKSLCYQIPALCFDGMTLVVSPLISLMKDQVDQLRASGVEADYLNSSQTFE
EQQQVQNRAISGQLKLLYLSPEKVMTNSFFQFISLCQVSFIAIDEAHCISQWGHDFRPEY
TQLGGLKGSFPNVPIMALTATADPTTQQDILQNLRLNRPHFHVGSFDRPNIRYTLVEKFK
PMEQLCRFVVAQKGKSGIVYCNSRNKVERIAETLCNKGVRAAAYHAGMENSLREKVQRDF
QRDNIQVVVATIAFGMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYDP
ADYVWLNKMLMEKPETPQRQIEQHKLQAIGEFAESQTCRRLVLLNYFGEHRQTACQNCDI
CLDPPKKYDGLLDAQKIMSAIYRTGQSYGAHYVIAVLRGMNNQKIRDQQHDQLSVYGIGK
EHSTEYWQSVLRQLIHLGLVRQMIGEYGNTLQLTENAKPILRGEMPLELATPRLSSIVTT
AMMHKSAVGSYDKDLFARLRFLRKQIADKENIPPYIVFNDATLQEMAQYQPVSNIEMLQI
NGVGTIKLERFGQAFLSLIREHKNARATE
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacctgacctcatccgaacccatgaaaagtgcggtggattttctcgataaatcg
tcggcaaaatccaccgcactttatgcgacggcaaagaatgtgttgcattcggtgttcggc
tatcaagcgtttcgcaaagggcaagaggaaattatccaggcggcgctaaatgggcaagac
tgcttggtcattatggcgacgggtacgggaaaatccttgtgctatcaaattcctgcgttg
tgttttgacgggatgactttggtggtgtcgccattgatttcactaatgaaagaccaagtg
gatcagctacgcgccagtggcgtagaagcggattatttaaactcctcgcaaacctttgaa
gagcaacaacaggtgcaaaatagggcgatttccgggcagttaaaattgttgtatttgtcc
ccggaaaaagtcatgaccaacagttttttccaatttatttccttatgtcaggtgagcttt
atcgccattgatgaggcgcactgcatttcccaatggggacacgattttcgccctgaatat
acccaactcggtggcttaaaaggcagtttcccgaatgtgccgattatggctttgacagcc
acggcagatcccacaacgcaacaagatattctgcaaaatctccggctaaatcgaccgcac
tttcatgtgggcagtttcgatcgtccgaatattcgttacaccttggtagaaaaatttaag
ccgatggagcagctgtgtcgtttcgttgtggcacaaaaaggaaaaagtggcattgtttat
tgcaacagccgcaacaaagtggagcgcattgcggaaacgttgtgtaacaaaggcgtgcgg
gcggcagcgtatcatgctggcatggaaaatagcttgcgggaaaaggtacaacgggatttt
cagcgggataacattcaagtggtggtggcgacgatcgccttcggtatggggattaataaa
tccaacgtgcgctttgtggcacattttgatttgccgcgtagcattgaatcctactatcaa
gaaaccggccgtgcagggcgtgacgatttgccggctgaggcggtgttgttttacgatccg
gcggattatgtgtggttgaacaaaatgctcatggaaaagccggaaacgccacaacgccaa
atcgaacagcataaattgcaagccatcggtgaatttgccgagagccaaacctgtcgccgt
ttggtcttattgaattattttggcgaacatcgtcaaaccgcctgtcaaaattgcgatatt
tgtcttgatccgccgaaaaaatacgatgggttgttggacgcgcaaaaaatcatgtcggca
atttatcgcaccggtcaatcttatggcgcccattatgtcattgccgtcttgcgtggcatg
aataaccagaaaattcgtgaccagcagcacgaccaactgagtgtgtatggcatcggcaaa
gaacacagcacggaatactggcagtccgtgttgcgtcaactcattcatttgggcttggtg
cgtcaaatgatcggtgaatatggcaatacgttacagctcacagaaaacgccaagccgatt
ttgcggggagagatgccgttggaattggcaacgccacgtctatcgtctatcgtcactacg
gccatgatgcacaaaagtgcggtcggttcttacgacaaagatttatttgcacgtttgcgc
ttcctgcgtaagcaaattgccgataaggaaaatattccgccatatatcgtgtttaacgat
gcgactttgcaagaaatggcgcaataccaaccggtcagcaatattgaaatgttgcaaatt
aacggtgtcggtacgattaaattggagcgtttcggacaagcgtttctgtctttaatccgc
gaacataaaaatgcccgcgcaaccgaataa
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