Aggregatibacter segnis: NCTC10977_00646
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Entry
NCTC10977_00646 CDS
T06075
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aseg
Aggregatibacter segnis
Pathway
aseg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aseg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC10977_00646 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aseg03021
]
NCTC10977_00646 (rpoA)
03400 DNA repair and recombination proteins [BR:
aseg03400
]
NCTC10977_00646 (rpoA)
Enzymes [BR:
aseg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC10977_00646 (rpoA)
Transcription machinery [BR:
aseg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC10977_00646 (rpoA)
DNA repair and recombination proteins [BR:
aseg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC10977_00646 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
SQH64125
LinkDB
All DBs
Position
1:624620..625609
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQISSTQAKVILEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDIIEVLLNLKGLAVKVQNKDDVLLTLSKSGIGPVVAANITHDGD
VEIVNPEHVICHLTDENASINMRIRVQRGRGYVPASARTQNQDEDRPIGRLLVDACYSPI
DRIAYNVEAARVEQRTDLDKLVIELETNGTIDPEDAIRRAATILAEQLDAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttacagaatttttaaaaccacgtttagttgatattgagcaaattagc
tcaactcaggctaaggtgatcttagagcctttagagcgtggtttcggtcatactctagga
aatgcattacgtcgaattcttttatcttcaatgccaggttgtgctgttactgaagtagag
attgatggtgtactgcatgaatatagtagtaaagaaggtgtacaagaagatattatcgaa
gtactgctaaacttaaaaggtttagctgtaaaggtacaaaataaagatgatgttcttttg
acacttagtaagtctggaattggccctgttgttgctgcaaacattacccatgatggtgat
gttgaaattgtaaatcctgaacatgtcatttgccatttaacagatgagaatgcgtcaatt
aatatgcgcattcgtgtccagcgtggtagaggatatgtcccagcatctgctcgtactcag
aatcaagatgaggaccgtccaattggacgtttattagtagatgcttgttatagcccaatt
gaccgtattgcttacaatgttgaggcagcacgtgttgaacaacgaaccgatttagataaa
ttggttattgagctagaaacaaatggtaccattgatcctgaggatgcgattcgtcgtgca
gcaacaattttagcagaacagcttgatgcattcgttgatttgcgtgatgttcgtcaacct
gaagttaaggaagagaagcctgaattcgatccgattctgcttcgtcctgttgatgactta
gagttgacagttcgttctgctaactgtttgaaagcagaaacaattcactatatcggtgat
ttagttcaacgtacagaagttgagttgttaaaaactcctaatttgggtaaaaaatcactt
actgaaattaaggatgtgctcgcttcaagaggcttatcactaggtatgcgccttgaaaat
tggccaccagcaagtattgctgaagactag
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