Aggregatibacter segnis: NCTC10977_00794
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Entry
NCTC10977_00794 CDS
T06075
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
aseg
Aggregatibacter segnis
Pathway
aseg03030
DNA replication
aseg03430
Mismatch repair
aseg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aseg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10977_00794 (holB)
03430 Mismatch repair
NCTC10977_00794 (holB)
03440 Homologous recombination
NCTC10977_00794 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aseg03032
]
NCTC10977_00794 (holB)
03400 DNA repair and recombination proteins [BR:
aseg03400
]
NCTC10977_00794 (holB)
Enzymes [BR:
aseg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10977_00794 (holB)
DNA replication proteins [BR:
aseg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10977_00794 (holB)
DNA repair and recombination proteins [BR:
aseg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10977_00794 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
Motif
Other DBs
NCBI-ProteinID:
SQH64273
LinkDB
All DBs
Position
1:complement(767991..768974)
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AA seq
327 aa
AA seq
DB search
MSLLTPWLTPTYHKITKAFDEALGHHALLIRADDGLGVEQLCSALAKRLMCLTPNGAEAC
GECHACHLMQANSHPDFQPISPIDNKDIGVDQIRAMNEQATQHAQQNGNKVVYIEQAHRL
TEAAANAILKTLEEPRPNTYFILQCDMQKALLPTIYSRCQVWNLLPPDTVTALQWLQSQT
SAETSDILTALRVNYARPLLALAMLEQNLLAQRREFLRQFWLFYRRCSPLELLPFFTKEL
VLQQLDWLSAFLSDSLKNKLHIHEDWICQDIEQGVIQFSQGLSAPALLKATQIVGKVRSD
LSANSALNLELILLDGLTRLITEVFEG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagccttttaaccccttggctgacgccaacttatcacaaaatcacaaaggcttttgat
gaggctttagggcaccacgccctgctgattcgcgccgatgacggccttggtgtagagcaa
ctttgctccgcgttggcaaaacgtctgatgtgcttaacacccaacggggcggaggcttgt
ggcgaatgccatgcttgccatttaatgcaagccaacagccacccggatttccagcctatc
tcgcccattgataacaaagacatcggcgtggatcaaattcgtgccatgaacgaacaagcg
acgcagcatgcgcagcaaaacggcaataaagtcgtttatatcgaacaggcacatcgtctg
acggaagccgctgccaacgccattttaaaaacactggaagagcctcgtccgaacacctat
ttcattttgcagtgcgatatgcaaaaggcgttgttgccaaccatttacagtcgctgccaa
gtgtggaacctcttaccaccggacacagtcacggcattacagtggttgcaatcacaaaca
tccgccgaaacatccgatatattgaccgcacttcgggtgaattatgctcgaccactgctc
gcacttgccatgttagagcaaaatttactggcgcaacgacgggaatttttacgccaattt
tggctattctatcgtcgttgttcgcccttggaattactgccgttttttactaaagaactt
gtcttgcagcagctggattggttgtcggcttttttaagcgacagtttgaaaaacaagctg
catattcacgaagactggatttgtcaggatattgaacaaggcgtcattcaatttagccaa
ggactgtctgcaccggcattgttaaaagcgacacaaattgttggcaaagtgcggtcagat
ttatcggcaaattcggcgttgaatttagaattgattttactcgacgggctgacccgttta
attactgaagtgtttgaaggataa
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