Aggregatibacter segnis: NCTC10977_00842
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Entry
NCTC10977_00842 CDS
T06075
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
aseg
Aggregatibacter segnis
Pathway
aseg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aseg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10977_00842 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aseg03019
]
NCTC10977_00842 (rppH)
Messenger RNA biogenesis [BR:
aseg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NCTC10977_00842 (rppH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
SQH64316
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All DBs
Position
1:815603..816202
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AA seq
199 aa
AA seq
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MIDFDGYRPNVGIVICNDKGQVLWAKRYGQNSWQFPQGGINDNETPEQAMYRELFEEVGL
TRKDVRVLYASKHWLRYKLPKRLLRYDSKPICIGQKQRWFLLQLVSDTKNINMQCSKTPE
FDGWRWVSFWYPVRQVVSFKRDVYRKAMKEFATVLFDENNKDLLLRADSSAVEEKKNTFS
TPKQTHSKHSKYSSQKYKR
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatttcgatggctaccgtccgaatgtaggcattgttatttgcaacgacaaaggg
caagtgctgtgggcgaaaagatacggacagaattcctggcaatttccgcaaggcgggatt
aatgataatgaaacgccagaacaagcgatgtaccgagaattgtttgaggaagtcggatta
acacgcaaagatgtgcgagtgctctatgcttctaagcattggctgcgttataaattgcca
aaacgactgttacgttatgattccaaacctatttgtatcggacagaaacaacgctggttt
ttattgcagttagtcagcgacaccaaaaacatcaatatgcaatgcagtaaaacaccggag
tttgacggttggcgttgggtgagtttctggtatccggtgcgtcaagtggtttctttcaaa
agagatgtctatcgtaaagcgatgaaagagtttgctacggtgttatttgatgaaaataac
aaagacttgttattgcgggctgactctagcgcagtagaagagaaaaagaataccttttca
acgccaaaacagacccattcaaagcattccaaatattcatcacaaaagtataagagataa
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