Aggregatibacter segnis: NCTC10977_01130
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Entry
NCTC10977_01130 CDS
T06075
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
aseg
Aggregatibacter segnis
Brite
KEGG Orthology (KO) [BR:
aseg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aseg03032
]
NCTC10977_01130 (ihfB)
03036 Chromosome and associated proteins [BR:
aseg03036
]
NCTC10977_01130 (ihfB)
03400 DNA repair and recombination proteins [BR:
aseg03400
]
NCTC10977_01130 (ihfB)
DNA replication proteins [BR:
aseg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC10977_01130 (ihfB)
Chromosome and associated proteins [BR:
aseg03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NCTC10977_01130 (ihfB)
DNA repair and recombination proteins [BR:
aseg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NCTC10977_01130 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
SQH64597
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All DBs
Position
1:1137722..1138006
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AA seq
94 aa
AA seq
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MTKSELIELLVQKNHNVPVKSVEEAVKAILEQMSYVLESGERIEVRGFGSFSLHCRQPRL
GRNPKTGEQVKLDAKCVPYFKAGKELRERVDVYA
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatcagagctgattgaacttttagtacagaaaaatcacaatgtacctgttaaa
tctgttgaagaagcagtaaaagcgattttagaacaaatgtcatatgtattagaaagtggt
gaacgtattgaagtacgtggattcggtagcttttctttgcattgtcgccagcctcgttta
ggtcgtaatcctaaaactggtgaacaagtaaaattagatgcaaaatgtgtaccttacttt
aaggcagggaaagagctaagagaacgcgttgatgtttacgcataa
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