KEGG   Aggregatibacter segnis: NCTC10977_01163
Entry
NCTC10977_01163   CDS       T06075                                 
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
aseg  Aggregatibacter segnis
Pathway
aseg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aseg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NCTC10977_01163 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aseg03400]
    NCTC10977_01163 (uvrB)
DNA repair and recombination proteins [BR:aseg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NCTC10977_01163 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      NCTC10977_01163 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD UB2H AAA_30 AAA_22 DUF4191 DUF87
Other DBs
NCBI-ProteinID: SQH64629
LinkDB
Position
1:1172123..1174165
AA seq 680 aa
MSEKINTKPFILHSDFKPSGDQPQAIAKLAENLEDGLAHQTLLGVTGSGKTFTIANVIAQ
LNRPAMLLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASI
NDQIEQMRLSATKSFLERRDTIVVASVSAIYGLGDPDSYLQMMLHLQQGAIINQRQILAK
LAELQYTRNDQAFQRGTFRVRGEIIDIFPAESDERAVRIELFDDEIERLSLFDPLTGSSF
GAVPRFTVYPKTHYVTPRERILDAIEKIKVELAQRREYFIKENKLLEEQRISQRTQFDIE
MMNELGYCSGIENYSRYLSGRDEGEPPPTLFDYMPSDAILIIDESHVTVPQIGGMYRGDR
SRKETLVEYGFRLPSALDNRPLRFEEFERLAPQTIYVSATPGPYELEKSGAEIIDQVVRP
TGLLDPQIEIRPVSIQVDDLLSEARQRADKNERVLVTTLTKKMAEDLTDYLDEHGIRVRY
LHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSL
IQTIGRAARNLNGKAILYADSITKSMEKAITETNRRREKQTKYNEDHGIVPQALNKKVGE
LLDIGQGANQKAKANKQRGKMVAEPTALYTVPTSPKEYQQQIKKLEQQMYKFAQDLEFEK
AAAVRDQLQQLRESFMLSGE
NT seq 2043 nt   +upstreamnt  +downstreamnt
atgtcagagaaaattaataccaagccttttatccttcattccgattttaagccctccggc
gatcagccacaagccattgccaagctcgccgaaaatttagaagacggcttggcgcaccaa
actttactgggcgttaccggctccggaaaaacctttacgattgccaatgtgattgcgcag
ttaaaccgaccggccatgttgcttgccccgaataaaaccctcgcggcgcagctttatgcg
gaaatgaaagccttttttcctgaaaatgcggtggaatatttcgtttcttactatgattat
taccaaccggaagcctatgtgccgagcagtgataccttcattgaaaaagatgcgtctatt
aacgatcaaatcgagcagatgcgtttgtcggcgactaagtcttttttggaacgtcgggat
accattgtggtcgcctcagtttccgctatttatggtttgggcgacccggattcttacttg
caaatgatgttgcacttgcagcaaggggcgataatcaatcagcgtcagattttggcgaag
ttggcagaattgcaatatacgcgtaacgatcaggcgtttcagcgcggtacatttcgtgta
cgtggggaaattatcgatattttcccggcagaatccgacgagcgcgcagtacgtatcgaa
ttatttgatgatgaaattgagcgtttaagtttattcgatccactcacaggaagtagcttt
ggtgccgtgccacgtttcaccgtgtatccaaaaacgcactacgtcacaccgcgcgagcgc
attttagatgccattgaaaaaattaaagtggaactggcgcaacgacgggaatatttcatt
aaagagaataaattgttagaagaacaacgcattagccaacgtactcaatttgatattgaa
atgatgaacgaattgggctattgctcggggattgaaaactactcacgttatctgtcgggc
agagatgaaggcgaaccgccgccaaccttatttgactatatgccgtccgatgccatttta
attatcgatgaatctcacgtcaccgtgccgcaaatcggcgggatgtatcgtggcgaccgt
tcccgtaaagaaacgttggtggaatatggcttccgtttgccttcagcgttggataaccgt
ccgttgcgttttgaggaatttgaacgtttggctccgcaaactatctatgtttcggctacc
ccggggccttatgagctagaaaaatccggtgcagaaattatcgatcaggttgtgcgtcca
acaggcttactcgatccgcaaattgaaattcgtccggtgtctattcaagtggatgatttg
ctttctgaagcgcgtcaaagagcggataaaaatgagcgcgttttagtgacgacgctgact
aaaaaaatggcggaagatttaacggattatttggatgaacacgggattcgagtgcgttat
ttgcactccgatattgataccgtagagcgggtagaaattatccgtgatttgcgcttaggc
gaatttgatgtgttggtcgggattaacttattacgggaaggcctggatattcctgaagta
tcactcgtggctattttagatgcggataaggaaggcttcttgcgctccgaacgttctttg
attcaaaccatcggacgtgccgcgcgaaacttgaatggtaaagcgattttgtatgcggac
agcatcaccaagtctatggaaaaagccattacggaaaccaatcgccgccgtgaaaaacaa
acgaaatacaatgaagatcacggcattgtgccgcaggcgttaaataaaaaagtgggcgaa
ttgttagacatcggtcagggcgccaatcaaaaagcgaaagccaataaacaacgcggaaaa
atggtggcagaaccgaccgcactttatacggtgccaacctcaccgaaagaatatcaacaa
caaatcaagaaactggaacagcaaatgtataaatttgcgcaagatttggaatttgaaaaa
gccgctgcggtgcgggatcaattacagcaattgcgggaaagttttatgctatcaggcgag
taa

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