Aggregatibacter segnis: NCTC10977_01266
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Entry
NCTC10977_01266 CDS
T06075
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aseg
Aggregatibacter segnis
Brite
KEGG Orthology (KO) [BR:
aseg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aseg03016
]
NCTC10977_01266 (truB)
Enzymes [BR:
aseg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC10977_01266 (truB)
Transfer RNA biogenesis [BR:
aseg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC10977_01266 (truB)
Prokaryotic type
NCTC10977_01266 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
SQH64720
LinkDB
All DBs
Position
1:1272664..1273584
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AA seq
306 aa
AA seq
DB search
MSKPRKRGRDIHGVFLLDKPQGMSSNDIMQKVKRIFQANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDADKHYLVTAKLGERTDTSDAEGQIVETREVKVKTSEILTALEQFRGNIL
QVPTMFSALKHNGKPLYEYARQGITVEREARPITIFELNFIEYNAPYLTLEVHCSKGTYI
RTLVDDLGEVLGCGAHVTMLRRTAVADYPTEKMLDWHALQSLAEQQDLALLDALLLPMDT
AVAKLPALILNESQTQGIGFGQRIKFDNPNRLQGQVRLFSHENRFLGVAVIDENNVIRPQ
RLVVYE
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccgcgtaaacgtgggcgtgatattcacggcgtgtttttgttggataagccg
caaggtatgtcttccaacgacatcatgcaaaaagtgaaacgcatttttcaggcaaacaaa
gcggggcataccggcgcgttagatccgcttgccaccggaatgttgcctatctgtttgggc
gaagccaccaagttttcgcagtttttgttagatgccgataaacattatttagtcacggca
aaactaggggaacgtactgatacatccgatgcagaaggacagattgttgaaactcgtgaa
gtaaaggttaaaacatctgaaattttgaccgcacttgagcaattccgtgggaatattttg
caagtgccaaccatgttttcggcgttgaagcataatggcaaaccgctttatgaatacgcc
cgtcaaggtatcacggtggagcgggaagcgcgtcccattacgatctttgaactgaacttc
atcgaatacaatgcgccttatttaaccctagaggtgcattgttccaaaggtacttacatt
cgcaccttggtggatgatttaggtgaggtattgggctgcggcgctcatgtaacgatgttg
cgtcgcacagcagtagcggattacccaacagaaaaaatgctagattggcacgctttacaa
agcttggcagaacagcaagatttagctttattagatgctttattattgccgatggatact
gccgtggcaaaattgccggcgttaatcttaaatgaaagtcaaacacaaggtatcggattt
ggtcaacggataaaattcgataaccccaacaggttgcaaggacaagtgcggttgttttct
catgaaaatcgcttccttggtgtggcagtgattgatgaaaataacgtgattcgtccacag
cgattagtggtatatgaatag
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