Aggregatibacter segnis: NCTC10977_01428
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Entry
NCTC10977_01428 CDS
T06075
Symbol
topA_2
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aseg
Aggregatibacter segnis
Brite
KEGG Orthology (KO) [BR:
aseg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aseg03032
]
NCTC10977_01428 (topA_2)
03400 DNA repair and recombination proteins [BR:
aseg03400
]
NCTC10977_01428 (topA_2)
Enzymes [BR:
aseg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC10977_01428 (topA_2)
DNA replication proteins [BR:
aseg03032
]
Prokaryotic type
DNA Topoisomerases
NCTC10977_01428 (topA_2)
DNA repair and recombination proteins [BR:
aseg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC10977_01428 (topA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
DUF4795
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
SQH64882
LinkDB
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Position
1:complement(1462439..1465045)
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AA seq
868 aa
AA seq
DB search
MTKSLVIVESPAKAKTINKYLGNNYVVKSSVGHIRDLPTVGSATGEKAKPISTKGLSAEE
KQAIKQQKEQDALVKRMGIDPYHSWKANYQILPGKEKVVAELKSLAKKADHIYLATDLDR
EGEAIAWHLREVIGGDDERYSRVVFNEITKNAIKQAFEHPENLNMDRVNAQQTRRFLDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVKLIVEREREIKAFVPQEYWEVSVLTNTPKGDEI
QLDVAQFKGKKFEPKNAEQAQSAVDFLTKSDYVISDLETKPTSSRPRAPFITSTLQQTAS
TRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSQDALNMVRGYIEKHYGHAYLPEKPNF
YSSKDNAQEAHEAIRPSDIHVGLNELVGMEKDAVRLYDLIWRQFVACQMPAAQYDSTTLT
VIAGDYTLTAKGRILRFDGWTKVLPQQSKSAEDQALPDVSVNSKLNLSAVQPQQYFTKPP
ARFSEAALVKELEKRGIGRPSTYAAIISTIQERGYVRTENRRFYAEKMGEIVTDRLNQSF
ADLMSYDFTANMEDVLDQIASGEKNWKTELNQFFKDFSTQLTKAELDELEGGMRPNNLVE
TDIVCPTCGRNMAIRTASTGVFLGCTGYSLPPKERCKTTINLIPEAELLNVLDDASETKA
LMERKRCQKCGTAMDSYIIDPHRKLHICGNNPNCEGYLVEEGKFKIKGYDGPVVECDKCG
GDMHLKLGRFGKYMGCTQCDNTRKILKNGEVAPPKEDPIPFPELKCEKSDAYFVLRDGAS
GVFMSAHNFPKSRETRAPKVAELALYRERLPEKLRYLADAPQVDPEGNEAIIRFSRKEKR
QYVTSEKNGKATKWIVDFVDGKWIERKK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatccttggttattgtggagtcgccggcgaaggcgaaaaccattaataaatat
ttaggaaacaattatgtagtgaaatccagcgtgggccatattcgtgatttgccaacggtg
ggttctgcgaccggagagaaagccaaacctatttccaccaaaggtcttagtgcggaagaa
aagcaagcgataaaacaacaaaaagaacaagatgctttagtcaaacgcatggggatcgac
ccatatcacagttggaaagccaactatcagattttacccggtaaagaaaaagtcgttgct
gaactaaaatccctcgccaaaaaagccgatcatatttatctcgccaccgacttggataga
gaaggagaggctattgcctggcatttacgcgaggtaattggcggcgatgatgaacgttat
agtcgcgttgtctttaatgaaattaccaaaaacgccattaaacaagcctttgaacatcct
gaaaatttaaacatggatagggtgaatgcgcagcaaacgcgccgtttcttagatcgtgtt
gtcggttttatggtgtcaccgttgctttggaaaaaagtggcgcgtgggttatctgccggc
cgtgtgcaatcggtcgccgtgaaattgattgtagaacgtgagcgtgagattaaggcgttt
gtgccgcaagaatattgggaagtttccgttcttactaacacaccgaaaggtgatgaaatt
cagttagatgttgcgcaatttaaaggcaaaaaatttgaaccgaaaaatgcggaacaagca
caaagtgcggtggattttttaactaaatccgattatgtcatttctgatttagaaaccaaa
ccgaccagctctcgaccaagagcgccttttattacttctacgctacaacaaacggcaagt
acccgtttgggctttggtgtgaagaaaaccatgatgttggcacaacgtttatatgaagcg
ggctacatcacttatatgcgtacggactccaccaatttaagccaagacgcgttaaatatg
gtgcgcggttatattgaaaaacattacggacacgcttatttaccggaaaaaccgaatttt
tactccagtaaagacaatgcacaagaagcccacgaggctattcgaccatccgatatccat
gttggattaaatgaattagtcggtatggaaaaagatgccgtgcgtttatatgatttaatt
tggcgtcaatttgtggcatgtcaaatgccggctgcgcaatatgacagcacaacattaacg
gtgatagcaggggattatacgttaacggccaaaggacgtattttacgttttgacggttgg
acaaaagtattgccgcaacaaagtaaatctgctgaagatcaagcgctaccggatgtttct
gtcaacagcaaactcaatttgtctgcagtgcagccacaacaatatttcactaagccaccg
gcacgtttttcagaagctgcattagtgaaagagttggaaaaacgtggtattggccgacct
tctacctatgctgccattatttctacgattcaggaacgtggttatgtgcgtacagaaaat
cgtcgtttttatgcggaaaaaatgggcgaaattgtgaccgatcgcttaaatcagtctttt
gctgatttgatgagctatgatttcactgccaatatggaagatgtattagaccaaatcgcg
tccggtgagaaaaattggaaaaccgaattaaatcaattcttcaaagatttctcaacacaa
ttgactaaggcagaattagacgaattagaaggcggaatgcgtccgaataatttggtcgaa
acagatattgtttgtccaacttgcggacgcaatatggctattagaacggctagcacgggc
gtcttcttaggctgcaccggctattctttaccgccgaaagaacgttgtaaaaccactatt
aatttgattccggaagcggaattgttaaatgtgttggatgatgcgtcggaaacgaaagcg
ctgatggaacgtaagcgttgtcagaaatgtggtaccgcgatggatagttacattatcgat
ccacatcgcaaattgcatatttgcggtaataacccaaattgcgagggctatttagtcgaa
gagggtaaatttaagattaaaggctatgacggcccggttgtcgaatgtgataagtgcggt
ggcgatatgcacctcaaattaggacgttttggtaaatacatgggctgtacgcaatgtgat
aacactcgtaaaattttgaaaaatggtgaagttgcaccaccaaaagaagacccgattcct
ttccccgaattaaaatgtgaaaaatcggatgcttattttgtattacgcgatggtgccagt
ggcgtgtttatgtccgcgcataatttcccgaaatctcgcgaaactcgcgccccgaaagtg
gcagaattggcgttgtatcgtgagcgtttaccggagaaattgcgctacttagccgatgca
ccacaagtcgatccagaggggaatgaggcaattattcgctttagccgtaaggaaaaacgt
caatatgttacctctgaaaagaatggcaaagccacgaaatggattgtggattttgttgat
ggaaaatggatagagcggaaaaagtaa
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