Aggregatibacter segnis: NCTC10977_01559
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Entry
NCTC10977_01559 CDS
T06075
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aseg
Aggregatibacter segnis
Pathway
aseg03420
Nucleotide excision repair
aseg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aseg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10977_01559 (uvrD)
03430 Mismatch repair
NCTC10977_01559 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aseg03400
]
NCTC10977_01559 (uvrD)
Enzymes [BR:
aseg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10977_01559 (uvrD)
DNA repair and recombination proteins [BR:
aseg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10977_01559 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NCTC10977_01559 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
SQH65008
LinkDB
All DBs
Position
1:complement(1605268..1607442)
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AA seq
724 aa
AA seq
DB search
MDFAELLDGLNDKQREAVSAPLGNYLVLAGAGSGKTRVLTHRIAWLIGVEGVSEGSIMAV
TFTNKAAAEMRHRIESVLFDGNQRLFGMWVGTFHSIAHRLLRAHHLDADLPQDFQILDSE
DQLRLLKRLMKLHHFDEKSFPPKQAAWYINNKKDEGLRPNQIDDHHDRQEREWIRIYQIY
QDACDRAGLVDFAEILLRSYELFLHKPLILQRYQQRFQHILVDEFQDTNKIQYEWIRLLA
GKTGKVMIVGDDDQSIYGWRGAKIENIQLFLKEFANAQTIRLEQNYRSTMNILQAANELI
SNNNNRLGKNLWSEGNQGDPVGIYAAFNELDEALFVASQIKTWIEDGGKLNDCAILYRSN
SQSRVIEEALIRSQIPYRIYGGMRFFERQEIKDALAYLRLIANRQDDAAFERVINTPPRG
IGDRTLDTLRNLTREHQITLWQATNLALQENKLAGRAATALLRFMELINSLQRDTEEMPL
FAQTDFVIKHSGLYEMYKQEKGEKGEVRIENLEELVSAAREFIKPEEAEDMTELTAFLTH
ASLEAGEEQAAPHQACVEMMTLHSAKGLEFPRVFMIGVEEGLFPSFRSFEEAGRLEEERR
LAYVGITRAKQKLTISYAESRRLYGKEERHLPSRFITELPQQCLQEIRLRGTVTRALNQS
KVGSVSPIANESEWKMGQKVKHEKFGFGTVINVEGADNNLRLQIAFQNQGIKWLIAHLAK
LEKV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgcagaattattagatggcttaaacgataaacaacgggaagcggtgagtgcg
ccattgggcaattatttggtgttggcgggcgcggggagtggtaaaacccgcgtattgacg
caccgaattgcgtggctgattggcgttgaaggtgtctccgaagggagcattatggcggtg
actttcaccaacaaagctgcggcagaaatgcgtcatcgtattgaatccgtcttgttcgac
ggcaatcagcgtttgtttggtatgtgggtcggcacctttcacagcattgctcatcgactt
ctgcgtgctcatcatcttgatgcggatttgccgcaagatttccagattttagattcggaa
gaccaattgcgtttactcaaacgcctcatgaaattacatcattttgacgaaaaaagtttc
ccgccaaaacaagctgcttggtatatcaataataaaaaagacgaaggcttgcgcccgaat
caaattgatgatcatcacgatcgtcaagaacgagaatggattcgaatttatcagatttat
caagatgcttgcgatcgtgcaggactggtagattttgctgaaattttattgcgctcgtac
gaattgtttttacataaaccactgattttacaacgttaccaacaacgttttcagcatatt
ttggtggatgagtttcaagacactaacaaaattcaatatgaatggattcgtttattggcg
ggcaaaaccggcaaagtgatgattgtaggggatgacgaccaatctatttacggctggcgc
ggggcaaaaatcgaaaatattcagttatttttgaaagagtttgccaatgcacaaaccatt
cgattagaacaaaattaccgttccaccatgaatattttgcaggctgctaatgagttaatt
tctaataacaacaaccgactagggaaaaatttatggtcggaaggaaatcaaggcgaccct
gtaggcatttatgcggcttttaacgaattggatgaagcgctgtttgttgcctcacaaatt
aaaacttggattgaagacggcggcaaactcaacgattgtgccattttatatcgcagtaac
agtcaatcacgggtgattgaagaagcgttgattcgttcacaaattccgtatcgtatttat
ggtggcatgcgcttcttcgaacgtcaggaaatcaaggatgccttggcgtatttgcgctta
attgctaatcgccaagacgatgccgcctttgaacgcgttattaatacaccaccacggggc
attggtgatcgcacgttggacactttgcgtaacctgactcgcgaacatcaaatcacgtta
tggcaagccaccaatttggcattgcaggaaaataaactggcaggccgtgccgcgaccgct
ttgcttcgctttatggaattaatcaattctctgcaacgggatacggaagagatgccgttg
tttgcacaaacagattttgtcattaagcattccggtttgtatgaaatgtataaacaggaa
aagggcgaaaaaggcgaggtacgcattgaaaacttggaagaattggtctctgccgctcgc
gaatttatcaagcctgaagaggcggaagatatgacagagcttacggctttcttgacgcac
gcgtcgttagaagcgggcgaagagcaagcggcaccgcaccaagcctgtgtggaaatgatg
accttgcactcagcaaaaggcttggagtttcctcgagtgtttatgattggcgtagaggaa
gggttattcccaagtttccgttcctttgaagaagcggggcgtttggaagaagaacgtcgt
ttggcttatgtggggattacccgagccaaacaaaaacttaccatttcttacgcggaaagt
cgtcgtttatatggcaaagaagaacgtcatttgccttctcgttttatcacggaattgcca
caacaatgtttacaggaaatccgtttacgcggcaccgttacacgcgccttgaatcaatct
aaagtaggcagtgtttcgccgattgccaacgaaagcgaatggaaaatgggacaaaaagtg
aaacatgaaaaattcggttttggtacggtgattaatgtagaaggggcggacaataatttg
cgcctacaaattgcgttccagaatcaaggaattaaatggctgatcgcccatttggcgaag
ttggagaaagtttaa
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