Acinetobacter seifertii: I8T81_03300
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Entry
I8T81_03300 CDS
T07113
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
asei
Acinetobacter seifertii
Brite
KEGG Orthology (KO) [BR:
asei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asei03016
]
I8T81_03300
Enzymes [BR:
asei01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
I8T81_03300
Transfer RNA biogenesis [BR:
asei03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
I8T81_03300
Prokaryotic type
tRNA splicing ligases
I8T81_03300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
QPV59875
LinkDB
All DBs
Position
complement(672357..673562)
Genome browser
AA seq
401 aa
AA seq
DB search
MGIQKILNEEALYGVPVKIFTQDIDSESIEQLKKMAQLQFIYSHIAVMPDVHVGKGATVG
SVIPTKHAIIPAAVGVDIGCGMNAIRLSLKASQLPDNLSRLRDAIERKVPVGFALHKQVK
AKASSIIPLEKRLQPIVKKHPGLIRMLRQFDATWQKQLGTLGGGNHFIELCIDENQDVWV
MLHSGSRGLGNVIGTYFIELAKKEAQHRFGHVPDKDLSYFAEGSNSFNDYVEAVEWAQEY
AFENRKEMMRLVLEAIRPILPSFQMTKEAINCHHNYVSRETHFGENLLVTRKGAIRAGLD
ELGIIPGSMGARSYIVRGKANSESFCSCSHGAGRKMSRSKAKILFNQQDLIEQTKGIECR
KDSGVVDEIPSAYKDIDEVMANQSDLIEVVHTLKQVLCIKG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggcatacaaaaaatattaaatgaagaggcactctatggtgtccctgttaaaattttc
actcaagatatagacagtgaaagtatcgaacaattgaagaaaatggcacaactgcaattt
atatattcacatattgctgttatgccagatgttcacgtaggaaaaggtgcaactgtagga
agtgttattccgactaaacatgccattattccagctgcagtcggtgtagacattggctgt
ggaatgaatgcaattcgtttaagtctaaaggcttcacagctacctgataacttgagtcgt
ttacgtgatgcaattgaacgtaaagtaccagttggatttgctttacataagcaggtcaaa
gctaaagcatcgagtattatcccactcgaaaagcgcttacaaccgattgtaaaaaaacat
cctggtttaattcgaatgcttcggcagtttgatgccacttggcaaaaacaattaggcaca
ttaggtggtggcaatcactttatagagttatgtattgatgaaaatcaagatgtatgggta
atgctacattcaggtagccgaggacttggtaacgtcattggtacttattttattgagctc
gccaagaaagaagcacaacatcgctttggacacgtacctgataaagacttaagttatttt
gctgaaggttcaaacagttttaatgattatgtagaagctgtggagtgggcccaagaatat
gcttttgaaaatcgtaaagaaatgatgcgattagtcttagaagcaatccgacctattcta
ccctcgtttcaaatgacaaaagaagcaattaattgtcatcataattatgtaagtcgagaa
acccattttggtgaaaatcttttagttaccaggaaaggggcgattagagcaggtttagat
gagttaggaattattcctggctctatgggagcacgctcttatattgttagaggaaaagct
aattctgagtctttttgttcatgttctcacggcgctgggcgtaaaatgagccgtagcaag
gcaaaaattctttttaatcaacaagacttaattgagcaaaccaaaggtattgagtgccgt
aaagacagtggcgttgtcgatgagatcccaagtgcttacaaagatattgatgaagtcatg
gcgaaccaatcagatcttattgaagtggtccatacacttaaacaagttttatgtattaaa
ggttaa
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