KEGG   Acinetobacter seifertii: I8T81_07170
Entry
I8T81_07170       CDS       T07113                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
asei  Acinetobacter seifertii
Pathway
asei02024  Quorum sensing
asei03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:asei00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    I8T81_07170 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    I8T81_07170 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:asei03019]
    I8T81_07170 (hfq)
   03036 Chromosome and associated proteins [BR:asei03036]
    I8T81_07170 (hfq)
Messenger RNA biogenesis [BR:asei03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     I8T81_07170 (hfq)
Chromosome and associated proteins [BR:asei03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    I8T81_07170 (hfq)
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: QPV60588
LinkDB
Position
1519473..1519985
AA seq 170 aa
MSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQMVYKHAIS
TVVPARNPRPAGAQGAGFPAQGGSQGGFGGQGTGFGGGQGGGFGGQGGFGGQGGFGGQGG
GFGGQGGFGGQGGFGGQGGGFGGQGGFGGHQGGFDGDSKFEDGQEDENNR
NT seq 513 nt   +upstreamnt  +downstreamnt
atgtctaaaggtcaaactttacaagatccgttcttaaattctctccgtaaagaacgtatc
ccagtttctattttccttgttaacggtattaaattacaaggtcatattgaatcttttgac
caatatgttgttttattaaaaaatactgtaagtcaaatggtttacaaacacgctatttct
acggttgttccagctcgtaaccctcgtccagcaggtgcacaaggtgcaggtttcccagct
cagggtggtagtcaaggtggcttcggtggtcaaggtactggctttggcggcggtcaaggt
ggcggcttcggcggtcaaggtggcttcggcggtcaaggtggcttcggtggtcaaggtggc
ggcttcggcggtcaaggtggcttcggcggtcaaggtggcttcggtggtcaaggtggcggc
ttcggcggtcaaggtggcttcggtggacaccaaggcggttttgatggcgattctaaattt
gaagatggtcaagaagacgaaaataatcgttaa

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