Acinetobacter seifertii: I8T81_11260
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Entry
I8T81_11260 CDS
T07113
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
asei
Acinetobacter seifertii
Pathway
asei03030
DNA replication
asei03430
Mismatch repair
asei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I8T81_11260 (dnaE)
03430 Mismatch repair
I8T81_11260 (dnaE)
03440 Homologous recombination
I8T81_11260 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asei03032
]
I8T81_11260 (dnaE)
03400 DNA repair and recombination proteins [BR:
asei03400
]
I8T81_11260 (dnaE)
Enzymes [BR:
asei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I8T81_11260 (dnaE)
DNA replication proteins [BR:
asei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I8T81_11260 (dnaE)
DNA repair and recombination proteins [BR:
asei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I8T81_11260 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QPV57879
LinkDB
All DBs
Position
2430529..2434092
Genome browser
AA seq
1187 aa
AA seq
DB search
MQFVHLGIYTEFSITESIVRIPDLVKAAVKDEMPALALTDLSNLHAAVKFYNSCLKKGIK
PILGSTIRLNDAQHRVTLLAMSNVGWKSLTEIVSRGFIEGQQLSIPCVQKEWVLEQHQDI
IVLLGQHSDVGQMLCSSNPQKAEPLLEEWIEKFGNRVYLALTRTDRAGEEDFIQEAAKLA
AKYNVGVVAHNDVHFVEKEDFEAHEARVCIADGYVLADDRRPRLYSPEQHFKTSDEMIEL
FSDIPSAIENTYNIAKRCNVSLQLGTYFLPDYPIPDGFTIDTYFEHLSKVGLEERLDYLY
PVEKRGEDWPEIRKPYDERIDYEVGIILKMGFPGYFLIVMDFIQWAKNNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYDLLFERFLNPERVSMPDFDVDFCIAGRDRVIDYVSRTYGRE
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMVPTKPLGVDLATAIEMEPQLKDI
VTNPSNPDNDDASEIWEMALKLEGITRNTGKHAGGVVIAPGKITDFSAVLCDEDGTSRVA
QYDKDDVEAAGLVKFDFLGLRNLTVIEDAIQNINKNRDSNDPLNISHVPLDDAKAYSVFA
DANTTAVFQFESVGMKRMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGDFEYL
HPLLEGVLEPTYGIMVYQEQVMQTAQICAGYTLGGADLLRRAMGKKKPEEMVKQRQIFLE
GAGQKGIDESTANHIFDYMEKFAGYGFNKSHAAAYALVAYHTAWLKAHYPAEFMAAVMSS
EMQNTDSVVFLIDDCRNNGLEVLPPSVNMSTYHFHASDDKTIVYGLGAIKGVGEQAMQSV
IDSRRQQGPYTDLFDFCHRIDLKKINKRTLEALIRAGALDCLGIERSSLMAQLPEAVQAA
EQARSNRESGIMDLFGEVEEVQRKPAKPVKPWSDEVRLKGEKDTLGLYLTGHPIDVYRQE
LKAFIPAKLNEITATRRGVTTVYAGLVLDVANFPNRVVIVLDDGTARIEVSCNHERFQRF
KDIIQVEHVVVFEGEIYEREGFDRPMGRLNKAFNLNEIRQKRANSIQIKLTNDLMQPSLA
KDLQNILLPYCNVDMHQHIALNLHIDQPYAQAELQLGPQWKVAPLDELLAKLRDYFGKDN
IHVEYQVKSKAAKAADPVRPQPVASPPVDMTIDDALDSYQSEVSQYS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttgttcatctcggtatttatacagaattttcgattacagagtcgattgttcgc
atacccgacttggtcaaggctgctgtaaaggatgaaatgcctgcactggctcttacagac
ttatctaaccttcacgctgccgtaaagttttataactcttgccttaaaaaaggtattaaa
cctattttaggtagtaccatacgtcttaatgatgctcagcatcgtgtaactttacttgca
atgagtaatgttggctggaaaagcctgaccgaaatcgtttcacgcggttttattgaaggt
caacaacttagtatcccttgtgtacaaaaagaatgggtacttgaacagcatcaagatatt
attgttctgctaggtcaacacagtgatgttggtcaaatgctttgctcatctaacccacaa
aaagctgaacctttacttgaagagtggattgaaaagtttggtaatcgtgtttatctcgct
ttaacacgtacggatcgtgctggtgaagaagactttattcaagaagcagcaaaacttgct
gccaaatataatgttggtgtagtagcgcataatgatgtgcactttgtagaaaaagaagat
tttgaggcacatgaagcacgtgtttgtattgctgatggttatgtattagcagatgatcgt
cgtccacgcttatatagtcctgaacagcattttaaaacctccgatgaaatgatcgaattg
ttttctgatatcccaagtgctatcgaaaacacctacaatattgcaaaacgctgtaatgtt
agcctacaacttggtacctactttttacctgattacccaattccagatggatttaccatc
gacacttactttgagcatttgtcaaaagtaggtttagaagaacgcttagattacctgtat
cctgttgaaaaacgtggtgaagactggccagaaattcgtaaaccttatgatgaacgaatt
gattatgaagttggaattatccttaagatgggattccctggttacttcttgatcgtaatg
gactttatccagtgggctaaaaataatggcgttcctgttggtcctggccgtggttcaggt
gcaggttcattagtagcctatagcttaaaaattactgaccttgacccacttcgttatgac
ttgcttttcgaacgtttcttaaacccagaacgtgtatcgatgcccgactttgacgtcgat
ttctgtattgctggtcgtgaccgtgttatcgactatgtatcacgtacctatggtcgtgaa
gcagtttcgcaaattgcaactttcggtacaatggctgcaaaaggtgcgattcgtgacgtt
gcacgtgttttaggtaaatcttacgggttagctgatcgtatttcaaaaatggtgccgact
aagccacttggtgtagatttggcaaccgctattgagatggaacctcagcttaaagatatc
gtcactaacccatctaacccagataatgatgatgccagtgaaatctgggaaatggcatta
aaacttgaaggtatcactcgaaatactggtaaacatgccggtggtgttgttattgcaccc
ggtaagattaccgatttctcggctgtactatgtgatgaagacggaaccagccgtgttgca
caatacgataaagacgatgtagaagccgctggtctggtaaaatttgacttcttgggttta
cgtaacttaaccgttattgaagatgctattcaaaatattaataaaaatcgcgatagcaat
gaccctctaaacatatctcacgtcccactcgacgacgctaaagcatattctgtgtttgcc
gatgcaaatacaacagcggtattccagtttgaatccgtcggcatgaaacgaatgcttaaa
gaggcacgtccaagcaaattcgaagaaattattgcgttcgtatctttgtatcgtccgggc
ccaatggacctgattcctgactttattcatcgtatgcatggtggggattttgaatatctt
catcctttgcttgaaggcgtattagagccaacctacgggattatggtttatcaggaacag
gtaatgcaaactgcacagatttgtgcgggttatacgctcggtggcgctgacttacttcgc
cgtgcaatgggtaaaaagaaacctgaagaaatggtgaaacaacgccaaatcttccttgaa
ggtgctggacaaaaaggtattgatgaaagcaccgccaaccatatctttgactatatggaa
aagttcgcgggctatggtttcaacaaatcacacgcggctgcttatgcccttgttgcatac
cataccgcatggttaaaagctcattaccctgccgaatttatggcagcggtaatgtcatca
gaaatgcagaacactgacagcgtcgtatttttgattgatgactgtcgaaataatggactc
gaagttctacctccgtcagttaacatgtcgacttatcatttccatgccagtgatgataaa
accatcgtttatggtttaggtgcaattaaaggtgttggtgaacaggcaatgcagtctgtt
attgactcacgccgtcaacaagggccttatacagacctattcgacttctgccaccgtatt
gatttgaaaaaaatcaataaacgaactttagaagcgcttatccgtgctggtgcactagat
tgtttaggtattgaacgttctagtttaatggctcaactgccagaagcagtacaagcagcc
gaacaagcacgtagtaatcgtgaaagcgggattatggacttatttggtgaagttgaagaa
gttcagcgtaaacccgctaagccagttaaaccatggagtgatgaagttcgtcttaaaggt
gaaaaagatacgcttggtttgtatttaacaggtcaccctattgatgtttaccgtcaagaa
ctcaaagcctttattccagcaaaacttaatgaaattactgcgactcgtcgtggtgtaaca
actgtttatgcgggtctggttttggacgtagccaacttcccaaatcgcgtagttattgtg
ctagacgatggtacagcacgtattgaagtcagttgtaatcatgaacgcttccaacgcttt
aaagatatcatacaagttgaacatgtagttgtctttgaaggcgagatttatgagcgtgaa
ggctttgatcgtccaatgggccgtttaaacaaagcttttaacttaaatgaaattagacaa
aaacgtgccaatagcattcaaatcaagttaaccaatgatttaatgcaaccaagtttggca
aaagatctacaaaatatcttattgccttattgcaatgttgatatgcatcagcatattgca
ctaaatttacacattgaccaaccatatgctcaggccgagcttcaacttggcccacaatgg
aaagtcgctcctttagatgaacttctagccaagctaagagattactttggtaaagataat
attcatgttgaatatcaggtaaaatctaaggcagctaaagcagcagaccctgttcgtcca
caacctgttgcctcacctcctgtggacatgactattgatgatgcattggattcataccaa
agcgaagtttctcaatattcgtaa
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integrated database retrieval system
