Acinetobacter seifertii: I8T81_13715
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Entry
I8T81_13715 CDS
T07113
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
asei
Acinetobacter seifertii
Pathway
asei03030
DNA replication
asei03430
Mismatch repair
asei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I8T81_13715 (dnaQ)
03430 Mismatch repair
I8T81_13715 (dnaQ)
03440 Homologous recombination
I8T81_13715 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asei03032
]
I8T81_13715 (dnaQ)
03400 DNA repair and recombination proteins [BR:
asei03400
]
I8T81_13715 (dnaQ)
Enzymes [BR:
asei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I8T81_13715 (dnaQ)
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
I8T81_13715 (dnaQ)
DNA replication proteins [BR:
asei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I8T81_13715 (dnaQ)
RNase H
I8T81_13715 (dnaQ)
DNA repair and recombination proteins [BR:
asei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I8T81_13715 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QPV58342
LinkDB
All DBs
Position
2964936..2966315
Genome browser
AA seq
459 aa
AA seq
DB search
MSQTITLYVDGACRGNPGLGGWGAYVITEQGEHKLFGGEPDTTNNRMELTAAIEGVSFCP
PDAQLIIWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWQKLDAVCAGRNIEWNWIKGHA
GHAGNEMADQLANLGADKTAQELKQPQPVAAPQDIKKPEQDWLLDDPFGFDLVETTDDED
IALEPSQEVEMITVDEQVNEVEAVEQETKQQISNIHPQIVVTEAKLKLQGPRQLILDTET
TGFYFQDGDRIIEVGAIEMINRKLTGSSIHIYINPEKPVGDSENIHGISDDFLKDKPLYA
DIADTLFEYLKGAEIIAHNATFDMNFLDMEFRRVGLPALSEVCEVTDTLALAKNKHPGQK
NSLDALVRRYEIPARDRTFHGALLDAEILSDVYLAMTGGQVSFDMDALSQSEKDQQNTTR
TRVQIDLPVIYPSDEELSTHETWVKEFEKKHGEPCLFAK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaacaatcacactgtatgttgatggtgcatgtcgtggcaatcccggtttaggc
ggttggggtgcatatgtcattaccgaacagggtgaacataaattatttggcggtgaaccc
gatacaaccaataatcgtatggaacttactgcggcaattgaaggtgtttctttttgccca
cccgatgcacaattaattatctggaccgactcaaactatgtaaaacaaggtattacagag
tggattcatggctggaaaaagaaaaattggaaagatgttaaaaaccctgacctatggcaa
aaacttgatgctgtttgcgcaggcagaaatattgagtggaattggattaaaggccacgca
ggacatgcgggcaatgaaatggcagaccaacttgccaatttaggtgcagacaagactgct
caagaactcaagcaaccacagcctgttgctgcaccgcaagatataaaaaagcctgaacag
gactggttgctagacgacccttttggatttgatctggttgaaacaaccgatgatgaagat
atcgctcttgaaccatcacaagaagttgagatgattactgtagacgagcaagtaaatgaa
gttgaagctgtagagcaagaaactaagcagcaaattagcaacattcatccacagattgtg
gtgacagaagcaaagcttaaattgcaaggccctcgtcagctcattctcgatactgaaacg
actggtttctatttccaagatggcgaccgcattattgaagtcggcgcaatcgaaatgatt
aaccgtaagcttacgggtagttcaattcacatttatattaaccctgaaaaaccagtgggc
gattcagaaaacattcacggtatcagtgatgatttcttaaaagataaacccctctatgca
gacatcgcagatactttatttgagtatctaaaaggcgcagaaattatcgctcataacgcg
accttcgatatgaacttcttggatatggagtttagacgtgttgggttacctgctctttcc
gaagtttgtgaagttacggatactttagcacttgcaaaaaacaagcatccaggacagaaa
aactcactcgatgccctagtcagacgttatgaaattccagcgcgtgaccgtaccttccat
ggtgcgttacttgatgctgaaattctgtctgatgtttacttggcaatgacaggtggtcaa
gtatcgtttgatatggatgcactatcgcaaagtgaaaaagatcagcaaaatacaacaaga
actagagttcaaattgatttacccgtcatttacccttcagatgaagagttaagcacacat
gagacttgggtcaaagaatttgagaaaaaacatggagaaccttgcctttttgcaaaataa
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