Acinetobacter seifertii: I8T81_17305
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Entry
I8T81_17305 CDS
T07113
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
asei
Acinetobacter seifertii
Pathway
asei03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
asei00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I8T81_17305 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asei03021
]
I8T81_17305 (rpoB)
03400 DNA repair and recombination proteins [BR:
asei03400
]
I8T81_17305 (rpoB)
Enzymes [BR:
asei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I8T81_17305 (rpoB)
Transcription machinery [BR:
asei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I8T81_17305 (rpoB)
DNA repair and recombination proteins [BR:
asei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I8T81_17305 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
QPV59004
LinkDB
All DBs
Position
complement(3750614..3754702)
Genome browser
AA seq
1362 aa
AA seq
DB search
MAYSYTEKKRIRKNFGKLPQVMEAPYLLSIQVDSYRTFLQGGKSPKNREDIGLQAAFRSV
FPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAAPMRVKIRLIIKDRETKSIKDVR
EQEVYMGEMPLMTENGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIP
YRGSWLDFEFDAKDLVYVRIDRRRKLLATVVLRALGYNNEQILNLFYEKVPVYLDMGSYQ
IDLVPERLRGEMAQFDITDNEGKVIVEQGKRINARHVRQMEASGLTKLSVPDEYLYERIT
AEDITLRDGEVIAANTLLSHEVMVKLAEGGVKQFNILFTNDIDRGSFVADTLRADTTAGR
EEALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLSPVGRMKFNRRLGRPYEVGTDQ
KSREVEGILSHEDIIDVLRTLVEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRV
ERAVKERLSQAETDNLSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVS
ALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKANDFGFLETPY
RRVVDGRVTDAVEYLSAIEEVGTVIAQADSAVDKDGNLTEDFVSVRHQGEFVRMPPEKVT
HMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMEANVARD
SGVCVIANRGGAIEFVDASRIVIRVNEDEMVAGEAGVDIYNLIKYTRSNQNTCINQNVIV
NLGDKVARGDILADGPSTDMGELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSI
HIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVTAGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKAADVKDSSLRVPSGTKGTVIDVQVFTRDGLEKDDRALAIEKA
QLDSYRKDLKEEYKIFEEAARERVIRLLKGQESNGGGSTKRGDKLSEDLLSGLELVDLLE
IQPTDEAIAERLTQIQVFLKEKSAEIDEKFAEKKRKLATGDELTTGVLKVVKVYLAVKRR
IQPGDKMAGRHGNKGVVSNILPVEDMPHDANGVPVDIVLNPLGVPSRMNVGQILETHLGM
AARGLGDKIEKMLKEQRTVLELREFLDKIYNKVGGEQEDLDSLTDDEILALSGNLRAGVP
LATPVFDGAEESQIKDLLELADISRTGQTVLFDGRTGEQFDRPVTVGYMYMLKLNHLVDD
KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGR
TRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggcatactcatataccgaaaagaaacggatccgtaagaattttggtaagttgccccaa
gtaatggaagcaccgtacttactctcgattcaggtcgattcgtatagaacgttcttgcaa
ggtggcaaatctccaaaaaaccgtgaagatatcggtctccaggccgcatttcgttcagtt
tttcctatagaaagttattctggcaatgctgctttagaatttgttgagtatagccttggt
aagcctgagtttgatgtgcgtgaatgtattttacgtggttcgacttatgcggcaccaatg
cgcgtaaaaattcgtttgattattaaagatcgcgaaactaaatcaattaaagacgtacgt
gaacaagaagtctacatgggtgaaatgccactcatgactgaaaatggtacctttgtaatc
aatggtactgagcgtgtaatcgtatctcaattacaccgttcaccaggtgtgttcttcgac
catgataaaggtaagactcactcaagtggtaaagtgttgtattcagcacgtatcattcct
taccgtggttcatggttagacttcgagttcgatgcaaaagatctagtttacgtacgtatt
gaccgtcgtcgtaaattacttgctactgttgtgttacgtgcactaggttataacaatgaa
caaatcttgaatttgttctacgaaaaagtacctgtgtacctagacatgggcagttatcaa
attgaccttgttcctgagcgtttacgtggtgaaatggctcaatttgatattactgacaat
gaaggtaaagtcattgttgagcaaggtaaacgtattaacgcgcgccatgtacgtcaaatg
gaagcttcaggtttaactaagctttcagttcctgatgaatacttatatgagcgtattact
gctgaagatattactttacgtgatggtgaagtaattgctgcgaatacgttattaagccat
gaagtgatggtgaagttagcggaaggtggtgttaagcaatttaacatcctgttcacaaac
gacatcgatcgtggttcttttgttgctgatacattgcgtgcagacacaacagcaggacgt
gaagaagctttagttgaaatttataaagtaatgcgtccaggcgagccgccaacaaaagaa
gctgctgaaaacttattcaataacttattcttctcttctgagcgttatgacttatctcca
gtaggtcgtatgaagttcaaccgtcgtttaggtcgtccttacgaagttggtactgatcag
aagtctcgtgaagttgaaggtattttgtcgcacgaagatatcatcgatgtattacgtaca
ttagttgaaatccgtaacggtaaaggcgaagtagacgatatcgaccatttaggtaaccgt
cgtgtacgttctgttggtgaaatgacagagaaccaattccgtgttggtttagttcgtgtt
gagcgtgctgttaaagaacgtttaagccaagcagaaacagataacttgtctccacaagac
ttgattaacgctaagccagttgctgctgcaatcaaagaattctttggttcaagccagtta
tctcagttcatggaccaaaacaacccattatctgagattacacataagcgtcgtgtatct
gcgcttggtcctggtggtttaacacgtgagcgtgctggcttcgaagtacgtgacgtacat
caaactcactatggtcgtgtttgtccaattgaaactcctgaaggtccaaacattggtttg
atcaactcgctttctgtatatgcaaaagcgaatgatttcggtttcttggaaacaccttac
cgccgagttgtagatggtcgtgtaactgatgcggttgaatatttatctgctattgaggaa
gtaggcactgtgatcgcacaggccgattctgctgtagataaagatggcaacttaacagaa
gacttcgtttctgttcgtcaccaaggtgaattcgtacgtatgccacctgaaaaagtgacg
catatggacgtttctgcacagcaggttgtatctgttgctgcatcacttattccattcctt
gaacacgatgacgcgaaccgtgcattgatgggttcgaacatgcaacgtcaggctgttcct
actttacgtgctgacaagccacttgttggtactggtatggaagcgaacgtagcacgtgac
tctggtgtatgtgtaatcgcaaaccgtggtggtgcaattgaatttgtagatgcttctcgt
atcgttattcgtgtaaacgaagatgaaatggttgctggtgaggcgggtgtagatatctat
aacctcatcaaatatacacgttcgaaccaaaatacttgtattaaccaaaatgttatcgtg
aatttgggcgacaaagttgctcgtggtgacatcttggcagacggtccgtctacagacatg
ggtgaacttgcgcttggtcaaaacatgcgtgtagcgttcatgacatggaatggttacaac
tatgaagactcgatcttgttatctgagcgtgttcttcaagaagaccgtttaacttctatt
catattcaagaattgtcatgtgtagcacgtgatactaagttaggtgcagaagaaattact
gccgatattcctaacgtaggtgaagctgcgctttctaaacttgatgaatcaggtatcgtt
tatatcggtgctgaagttactgctggtgacatcttagttggtaaagtaacgcctaaaggc
gaaactcagttaactcctgaagaaaaattgcttcgcgcaatctttggtgaaaaagctgct
gatgttaaagattcatctttacgtgttccatctggtactaaaggtacagttatcgatgtt
caagtcttcactcgtgatggcttagagaaagatgaccgtgctttagcgattgaaaaagca
caacttgattcttaccgtaaagacttgaaagaagagtataaaatcttcgaagaagcggct
cgtgaacgtgtaattcgtttacttaaaggccaagagtctaatggcggtggttcaactaaa
cgcggtgataaactttctgaagatttattatctggtttagagcttgttgatttacttgaa
atccagccaacagatgaagcaatcgctgagcgtttaactcaaattcaagtattcttgaaa
gagaagagcgcagaaatcgatgagaaatttgctgagaagaaacgtaagcttgcaacaggt
gacgagttaacaactggtgtattgaaagttgttaaggtttacctagctgttaaacgtcgt
attcagcctggtgataagatggctggtcgtcacggtaacaagggtgttgtttctaacatc
ttacctgttgaagacatgccacacgatgctaacggtgtaccagtagatatcgtattgaac
ccactgggtgtaccatctcgtatgaacgtgggtcagattcttgagactcacttgggtatg
gcggctagagggcttggtgacaaaatcgaaaaaatgttgaaagaacaacgtacagtttta
gagctacgtgaattcttagacaagatttataacaaagtcggtggcgagcaagaagatctt
gatagcttaacggatgacgaaatccttgcactttcaggcaacttgcgcgctggtgtgcct
ttggctactccggtatttgatggtgctgaagaaagtcaaattaaagatttacttgaatta
gctgacatttcacgtacaggtcaaacagtattgtttgacggacgtacaggtgaacagttc
gatcgtccagtaactgttggttacatgtacatgcttaagttgaaccacttggttgatgac
aagatgcatgcgcgttcaactggttcttactcacttgttacacaacagccgcttggtggt
aaagcacaattcggtggtcagcgtttcggtgagatggaagtatgggcacttgaagcatac
ggtgcagcatatacccttcaagaaatgcttacagtgaagtcggatgacgttgaaggacgt
actcgcatctataagaatattgtagatggtaaccattatatggatccgggtatgcctgaa
tcgttcaacgtattgaccaaagagatccgttctttaggtatcaacattgaactgaaaaat
ggtgactaa
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