Achromobacter seleniivolatilans: RAS12_01860
Help
Entry
RAS12_01860 CDS
T09953
Symbol
bioD
Name
(GenBank) dethiobiotin synthase
KO
K01935
dethiobiotin synthetase [EC:
6.3.3.3
]
K02169
malonyl-CoA O-methyltransferase [EC:
2.1.1.197
]
Organism
asel
Achromobacter seleniivolatilans
Pathway
asel00780
Biotin metabolism
asel01100
Metabolic pathways
asel01240
Biosynthesis of cofactors
Module
asel_M00123
Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
asel_M00572
Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP
Brite
KEGG Orthology (KO) [BR:
asel00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
RAS12_01860 (bioD)
Enzymes [BR:
asel01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.197 malonyl-[acyl-carrier protein] O-methyltransferase
RAS12_01860 (bioD)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.3 dethiobiotin synthase
RAS12_01860 (bioD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_26
Methyltransf_12
Methyltransf_25
Methyltransf_11
Methyltransf_23
Methyltransf_31
Ubie_methyltran
MTS
PrmA
CbiA
PCMT
Methyltransf_16
NodS
RrnaAD
DUF938
CMAS
Motif
Other DBs
NCBI-ProteinID:
WMD21136
UniProt:
A0ABY9M2A8
LinkDB
All DBs
Position
complement(409264..410727)
Genome browser
AA seq
487 aa
AA seq
DB search
MTQAFRNDQVGARFGAAAGRYEDHAPIQRITAERLASDIAQLPLPPRPRILEIGCGTGLL
TQALARQLGAADWTVTDIAPGMLAAAQRGPALPGTARYALLDGEQPQALTGQYDLICSSL
AVQWFSDLNTGLGRLAELLAPGGYLAIATLAEGTFKEWQAAHEAACLVAATPHYPPRTAI
RPAMVNLNGSVRSERLIQNHPDGLNFLKGLKGIGATTPAPGRPPLSAAQLRRVLTAFDEQ
GATVTYHLAYGMWKKSMQRPAGVFVTGTDTGIGKTLVSAILARAWNADYWKPVQTGVSEE
PGDTETVAQLARLPSERLHLPAYVLQAPLSPWAAATLEDTVVDATSIVPPVTQAPLIVEG
AGGLYVPIDDTHMMIDLIARLDMPVVLAARSGLGTINHTLLSLEALKRRGIPVLGVIMSG
PLSAGNKEAIERFGDVRVLAEIPSLAKVDAAAVDALAQTIPPLDECLAALGRAAAEDDLQ
ALESARP
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaagcattccgcaatgatcaggtcggcgcccgcttcggcgcagccgctggccgc
tatgaagaccatgcgcccattcagcgcattacggccgaacggctggccagtgatatcgcg
caactgcctctgcccccgcgtccccgcattctggaaatcggttgcggtaccgggctgctg
acgcaagctttggcacgccaattgggcgcagccgactggaccgtgaccgatattgcgccc
ggcatgctcgccgcggcgcagcgcggacccgccctgcccggcaccgcgcgctacgccttg
ctggatggcgaacagccccaggcgctgaccggccagtacgacctgatctgctccagtctg
gccgtgcagtggttttctgatctgaacaccggcctgggccgccttgccgagctgctggcc
cccggcggttatctggccattgccacgctagccgagggcaccttcaaggaatggcaggcc
gcccacgaagccgcctgcctggtggccgccacgccacactacccgccgcgcaccgccatc
cgtccggctatggtcaatctgaacggtagcgtgcgcagcgaacggctgatacaaaatcat
cctgacggcctgaattttttgaagggtctgaaaggcataggggcaaccacgcctgcacct
gggcgcccgccgctctccgccgcgcaactgcgccgcgtgttgacggcatttgacgaacaa
ggagccacggtgacgtatcacctggcctacggtatgtggaaaaaatcgatgcaacgcccc
gccggagttttcgtgaccggcactgacaccggcataggcaagaccctggtgtccgccatc
ctggcgcgcgcctggaacgccgactattggaaaccggtgcaaaccggcgtgtcagaagag
ccgggcgacacggaaaccgtcgcgcaactggctcggctgccttctgaacgcctgcacctg
cccgcctacgtgttgcaggcgccgctgtcgccctgggctgccgccacgctggaagacacc
gtcgtcgacgccaccagcatcgtcccgcccgtgacacaggcgccgttgatcgtggaaggc
gcgggcggcctgtacgtgcccatcgacgacacgcacatgatgatcgatctgatcgcccgg
ctggacatgcccgtcgtgctcgccgcccgcagcggcctgggtaccatcaatcacacattg
ctcagtcttgaagcgctgaaacgccgtggcattcccgtgctgggcgtcatcatgagcggg
ccgctgtcggcaggcaacaaggaagccattgaacgctttggcgatgtgcgcgtgctggcc
gaaattccttctttggcgaaagtggatgctgccgcagtagatgctttagcgcaaaccatt
ccgcccctggacgagtgcctggccgcgctgggacgtgcagcggcagaggacgacttgcag
gcactggaaagcgcgcgcccgtaa
DBGET
integrated database retrieval system