Achromobacter seleniivolatilans: RAS12_06455
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Entry
RAS12_06455 CDS
T09953
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
asel
Achromobacter seleniivolatilans
Pathway
asel02020
Two-component system
asel02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
asel00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RAS12_06455
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RAS12_06455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asel03021
]
RAS12_06455
Transcription machinery [BR:
asel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RAS12_06455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
WMD22013
UniProt:
A0ABY9M4R8
LinkDB
All DBs
Position
complement(1440282..1441742)
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AA seq
486 aa
AA seq
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MGHPTQELRLRQQMTLAPRLQQSVKLLQMSALEFTTAVEHALATNPFLEDGDEQDTEPAP
AAIGQYCSNPNETAEPAPERTATAASDSDADDAPPDAPTYSGDYPTQSSTGGDGKDLGQW
ASASVSMRERLSLDLGNYHLEPRDRLLAEYIIDALDDDGYLRTPLTSLCDTGRPEFSPAP
DEGEWMAALRLVQQLDAPGLGARDLTECLSLQLAAARDVEPDIRDLALRVVHEHLDRLGK
NDCVGLRRLLECSDDALRDACALIRSLDPKPGGRYSADAPVYVVPDVFVDKWHSRWRVLP
NRHAMPQARLHRTYADLFRRSRLDDRSPMAQELQEARWLVRNVEQRYTTIQRVAEAIVKR
QQTFFEYGEVALRPLMLREVADDLDMHESTVSRATVGKYMVTPRGVFEFRHFFSRELATE
SGGSCSAAAVRALIKEMVDAEDPAMPLSDVTLTQQLAASGILLARRTVSKYRGQLRVPPA
ELRRQH
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
ttgggccaccctacgcaagaattgcgcctgcgtcagcaaatgacgctggctccccggctg
cagcagtccgtcaagctgcttcaaatgtccgcgctggagttcacgactgcggtggagcat
gccctggccaccaatcccttcctggaagatggcgatgagcaagacactgagccggcgccc
gccgccataggccagtattgttcgaaccccaacgaaactgccgaacccgcgcctgaacgg
accgccacggccgcatcggattccgacgcggatgacgcgccgcctgacgccccaacctat
tcgggcgactacccaacgcaatcctcgaccggtggggatggcaaggatctgggccagtgg
gccagcgcgtccgtgtccatgcgcgagcgcctgtccctggacttgggcaactaccatctc
gaaccccgtgaccggctgctggccgaatacatcattgacgctttggacgacgacggctac
cttcgcacgccgttgaccagcctgtgcgacaccggccgtccggagttcagccctgcgccc
gacgagggtgaatggatggcggccttgcgccttgtccagcagctggatgcgcccggcctg
ggcgcccgcgacctgaccgaatgcctgtccttgcagttggccgcggcgcgcgacgtcgag
cccgacatacgcgacctggcattgcgagtcgtgcatgaacatctggatcgcttgggtaaa
aacgattgcgtgggcctgcgccgcttgctcgaatgttcggacgacgctctgcgcgacgcc
tgcgcgctgatccgcagcctggacccaaagccgggcggccgctatagcgcagatgcgccc
gtctacgtcgtgcccgatgtgtttgtagacaaatggcattcccgctggcgcgtgctgccc
aatcggcacgccatgccgcaagcgcggctgcatcgcacttacgcggatcttttccggcgc
tctcgcctggatgaccgcagcccaatggcgcaggaactgcaagaagcccgctggctggtg
cgcaacgttgaacagcgctacaccaccattcaacgcgtagccgaagcaatcgtcaaacgg
caacagaccttctttgagtacggcgaagtcgccctgcggcccttgatgctgcgtgaagtg
gccgatgacctggacatgcacgaatccacggtgtcacgagcaacggtaggcaaatacatg
gtgaccccgcgtggcgtcttcgagttcaggcatttcttttcccgcgagctcgccaccgaa
tcgggcggctcatgttcggccgcggccgtgcgcgctctgatcaaggaaatggttgacgct
gaagatcccgccatgcctttgtccgacgtgacgctgacgcagcagttggcggccagcggc
attttgctggcgcggcgcacggtatcgaagtatcgcggccagttgcgcgtgccgcccgcc
gagttgcgccgccagcattga
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