KEGG   Achromobacter seleniivolatilans: RAS12_06455
Entry
RAS12_06455       CDS       T09953                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
asel  Achromobacter seleniivolatilans
Pathway
asel02020  Two-component system
asel02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:asel00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RAS12_06455
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    RAS12_06455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:asel03021]
    RAS12_06455
Transcription machinery [BR:asel03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     RAS12_06455
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR
Other DBs
NCBI-ProteinID: WMD22013
UniProt: A0ABY9M4R8
LinkDB
Position
complement(1440282..1441742)
AA seq 486 aa
MGHPTQELRLRQQMTLAPRLQQSVKLLQMSALEFTTAVEHALATNPFLEDGDEQDTEPAP
AAIGQYCSNPNETAEPAPERTATAASDSDADDAPPDAPTYSGDYPTQSSTGGDGKDLGQW
ASASVSMRERLSLDLGNYHLEPRDRLLAEYIIDALDDDGYLRTPLTSLCDTGRPEFSPAP
DEGEWMAALRLVQQLDAPGLGARDLTECLSLQLAAARDVEPDIRDLALRVVHEHLDRLGK
NDCVGLRRLLECSDDALRDACALIRSLDPKPGGRYSADAPVYVVPDVFVDKWHSRWRVLP
NRHAMPQARLHRTYADLFRRSRLDDRSPMAQELQEARWLVRNVEQRYTTIQRVAEAIVKR
QQTFFEYGEVALRPLMLREVADDLDMHESTVSRATVGKYMVTPRGVFEFRHFFSRELATE
SGGSCSAAAVRALIKEMVDAEDPAMPLSDVTLTQQLAASGILLARRTVSKYRGQLRVPPA
ELRRQH
NT seq 1461 nt   +upstreamnt  +downstreamnt
ttgggccaccctacgcaagaattgcgcctgcgtcagcaaatgacgctggctccccggctg
cagcagtccgtcaagctgcttcaaatgtccgcgctggagttcacgactgcggtggagcat
gccctggccaccaatcccttcctggaagatggcgatgagcaagacactgagccggcgccc
gccgccataggccagtattgttcgaaccccaacgaaactgccgaacccgcgcctgaacgg
accgccacggccgcatcggattccgacgcggatgacgcgccgcctgacgccccaacctat
tcgggcgactacccaacgcaatcctcgaccggtggggatggcaaggatctgggccagtgg
gccagcgcgtccgtgtccatgcgcgagcgcctgtccctggacttgggcaactaccatctc
gaaccccgtgaccggctgctggccgaatacatcattgacgctttggacgacgacggctac
cttcgcacgccgttgaccagcctgtgcgacaccggccgtccggagttcagccctgcgccc
gacgagggtgaatggatggcggccttgcgccttgtccagcagctggatgcgcccggcctg
ggcgcccgcgacctgaccgaatgcctgtccttgcagttggccgcggcgcgcgacgtcgag
cccgacatacgcgacctggcattgcgagtcgtgcatgaacatctggatcgcttgggtaaa
aacgattgcgtgggcctgcgccgcttgctcgaatgttcggacgacgctctgcgcgacgcc
tgcgcgctgatccgcagcctggacccaaagccgggcggccgctatagcgcagatgcgccc
gtctacgtcgtgcccgatgtgtttgtagacaaatggcattcccgctggcgcgtgctgccc
aatcggcacgccatgccgcaagcgcggctgcatcgcacttacgcggatcttttccggcgc
tctcgcctggatgaccgcagcccaatggcgcaggaactgcaagaagcccgctggctggtg
cgcaacgttgaacagcgctacaccaccattcaacgcgtagccgaagcaatcgtcaaacgg
caacagaccttctttgagtacggcgaagtcgccctgcggcccttgatgctgcgtgaagtg
gccgatgacctggacatgcacgaatccacggtgtcacgagcaacggtaggcaaatacatg
gtgaccccgcgtggcgtcttcgagttcaggcatttcttttcccgcgagctcgccaccgaa
tcgggcggctcatgttcggccgcggccgtgcgcgctctgatcaaggaaatggttgacgct
gaagatcccgccatgcctttgtccgacgtgacgctgacgcagcagttggcggccagcggc
attttgctggcgcggcgcacggtatcgaagtatcgcggccagttgcgcgtgccgcccgcc
gagttgcgccgccagcattga

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