Achromobacter seleniivolatilans: RAS12_06500
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Entry
RAS12_06500 CDS
T09953
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
asel
Achromobacter seleniivolatilans
Brite
KEGG Orthology (KO) [BR:
asel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asel03032
]
RAS12_06500
03400 DNA repair and recombination proteins [BR:
asel03400
]
RAS12_06500
Enzymes [BR:
asel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RAS12_06500
DNA replication proteins [BR:
asel03032
]
Prokaryotic type
DNA Topoisomerases
RAS12_06500
DNA repair and recombination proteins [BR:
asel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RAS12_06500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WMD22022
LinkDB
All DBs
Position
complement(1446820..1447914)
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AA seq
364 aa
AA seq
DB search
MDARISLDPESPAANAIALVYVDDTQPGYRRVRVNGRTFHYLDARGKRIADPCEIRRIHA
LVIPPAYEDVWICALPHGHLQATGRDARGRKQYRYHPAWAALRDADKYHNLLAFGQALPR
IRRQVARHMSAPGLTQEKVMATLVRLLETTLIRIGAREYAKSNKSYGLTTLKRRHATVAG
SSFRFRFQGKSGVAHDVTVKDRRVARIIKRCMDIPGQQLFQYLDEQGEKHPVESGAVNAY
LRTAGDGDFTAKHYRTWAGSVLAYAALQARPYIDESQAKQAVVDVIKQVSQRLANTPAVC
RACYVHPAILAAYLTGGLPARAKAPAGPRELSADEKRLLAFLRNVPAPAGADLPAAKGPS
ASKD
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggacgcccgaatatccctcgacccagaatctcctgccgccaacgcaatagcgctggtg
tacgttgacgacacgcagccggggtaccggcgcgttcgagtaaacggccgaacatttcat
tatctggacgcgcgcggcaaacggatcgcggacccctgtgaaatccggcgcatccacgcg
ctggtcattcccccggcctacgaggatgtgtggatctgcgctctgccccacggtcatctg
caagcgacggggcgcgacgcgcgtggccgcaagcaatatcgctaccaccccgcttgggcc
gcgttgcgagatgcggacaagtaccacaacctgttggccttcggccaggcgctgccccgt
atccgccggcaagtggcgcggcatatgtcggcgcctggattgactcaagagaaggtgatg
gcgacattggtgcgcctgctggagaccacgctaatccgcatcggggcacgggaatacgcc
aagtcgaacaaatcgtacggcctgaccacgctcaagcgccggcacgcaacggtggcaggc
agtagtttcagattccggtttcagggcaagagtggcgtggcccacgacgtcactgtcaaa
gaccggcgggtggcgcgcattatcaagcgctgcatggatatacctggacagcagctgttc
caataccttgatgagcagggagagaagcacccagtggaatccggcgcggtcaatgcctat
ttgcggactgccggagatggcgatttcacggcgaagcactatcgcacctgggccggctcc
gtgctggcgtacgccgcgctgcaagcacgcccctacatcgacgagagtcaggccaagcaa
gcggtcgtggatgtcatcaaacaggtatcgcaacggttggccaacacccccgccgtgtgc
cgcgcgtgttacgtacatccagccattcttgctgcgtacctgacaggcggactgccggct
cgggccaaggcgcctgccggcccgcgcgaactcagcgcggacgagaagcgcctgctggct
ttcttacgcaatgtgcccgcgcctgcaggcgcggacttgcccgccgcaaagggaccaagc
gcttcaaaagattga
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