KEGG   Achromobacter seleniivolatilans: RAS12_06845
Entry
RAS12_06845       CDS       T09953                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
asel  Achromobacter seleniivolatilans
Brite
KEGG Orthology (KO) [BR:asel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:asel03400]
    RAS12_06845
Enzymes [BR:asel01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RAS12_06845
    5.6.2.6  RNA 3'-5' helicase
     RAS12_06845
DNA repair and recombination proteins [BR:asel03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    RAS12_06845
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2 EpuA
Other DBs
NCBI-ProteinID: WMD22085
LinkDB
Position
1522917..1525379
AA seq 820 aa
MSPGRRGWDAPLTEWFAARGWKAAAFQRETWRRYLAGESGLLHTPTGSGKTMAAFGGPLL
ETLADSALRPLPAGAGPRVLWVTPLRALAADTARALTQTALDLNIGWTVALRTGDASSRD
KRLARQGKADVLVITPESLALLLSYPDTSARFGGLRCIVVDEWHELLGNKRGVLLQLCLA
RLRQMSPGARTWGLSATLGNLEEARAVLLPHAPASALVAGARPRKITISTLLPPGNGALP
WAGHLGLSQLPRVFKRLFDVRASLVFTNTRAQAELWHRALESIWPEDPSTLALHHGSLDP
KLRAAAEQGLRDGSVRCVVATSSLDLGVDFPAVDQVLQIGSPKGVARLLQRAGRAKHRPG
ESGQVICVPAQALELIEYAAARQAIARGEIESRTPPRGSLDVLAQHAVTVALGSGFDAGA
LYEEVRGTHAYAALDPATWQAVLDFIVQGGQALGNYPEFHRVVRDEDGRYRVHDRRIALR
HRLSIGTITADGAVSVKYLRGGGLGSVEEGFLARLRPGDRFQFAGRTLQLVRLEGMVAYV
RRAKGGDGPVATWQGGRMPLSTQLAKEVESLYTHPGAHPEMRAVEPLLRIQEQASVLPAR
GRLVAERIGTRRGMHLFLFPFAGRAVHEGMAAMIALRWGRQHANTFSYTVNDYGLMLTLA
EPAAIDDRLLRQLLSPENMADDLRHGVNLGELARRQFREIARVAGLLTPSLPGRAARSLR
QVQASSGLLYDVLRRYDPGHLLLAQAEREVFEFQLEAPRLMAALQDCHGRTLALCEPQAL
TPLSFPLWTESLRGQLSTETWQARVKRAAAQLEKRYARVA
NT seq 2463 nt   +upstreamnt  +downstreamnt
atgagcccggggcgccgaggctgggatgcgccgttgaccgaatggttcgcggcgcgcggc
tggaaggccgcggcttttcagcgagagacgtggcgccggtatctggcgggggaatccggg
ctgttgcatacgcccacgggcagcggcaagacgatggcggcgttcggcggcccattgctg
gaaacgttggcagattccgcgctgcgcccactgccggcgggcgcaggcccgcgcgtgtta
tgggtgacgccgctacgcgcgctggccgcggataccgcccgcgccctgactcaaactgcg
ctggacctgaacataggctggaccgtcgcgctgcgcaccggggacgccagttcacgcgat
aagcgcttggcgcgtcagggcaaggcagacgtgctcgtgatcacgcccgaatcgctggcg
ctgcttttgtcttatcccgacacgtcggcgcgctttggaggtttgcgctgcatcgtcgtg
gacgaatggcatgagctgctgggcaacaagcggggggtcctgctgcaactgtgcctggcg
cgtttgcggcagatgtcgccaggcgcgcgcacatggggtttgtctgccacgctgggcaat
ctggaggaagcgcgcgcagtgctgctgccccatgcgcctgccagcgcgctggtcgcgggg
gctcggcctcgcaagataacgatttctacccttttgccgcccggcaacggcgcgttgccg
tgggctgggcacttgggtctgtcgcagttgccaagagtgttcaagcgcttgttcgatgtg
cgggccagcctggtattcaccaacacccgcgcccaggccgagttgtggcaccgcgcattg
gaatccatctggcccgaagatccgtccacgcttgcgctgcaccacggttcgcttgaccct
aagttacgggcggcggccgagcaaggcttgcgcgacggcagtgtgcgctgcgttgtggcc
acatccagtctggacctgggcgtggattttcccgcagtggatcaggtcttgcagatcggc
agccccaagggcgtcgcgcggctgttgcaacgcgccggacgcgccaagcatcggcccggt
gagtcgggccaagttatctgcgtgccggcccaggcgctggaactgatcgagtacgcagca
gcccggcaggccatcgcgcggggcgagatcgaatcgcgcacgccgccacgcggcagcttg
gatgtgttggcccaacatgccgtgaccgtggcgctaggcagcggttttgacgcgggcgcg
ctatatgaagaagttcggggcacacatgcttatgccgcgctggacccggcaacgtggcag
gccgttctggatttcattgtgcagggcggccaagcgctgggtaactatccagagtttcac
cgcgttgtccgtgacgaggacggacgatatcgcgtgcatgaccgccgcatcgccttgcgt
catcgtctatccatcggcaccatcacggcggatggcgcggtgtcggtgaagtatctgcgg
ggaggcgggctggggtcggtggaagagggcttcctggcgcgtctgcgcccaggggaccgc
ttccaatttgctggccgcacgctgcaacttgtgcggctggaaggcatggttgcttatgtc
cggcgagccaaaggaggcgatgggcctgtcgccacgtggcagggcgggcgcatgccattg
tctacgcaactggcgaaagaggtggaaagcctgtacacgcatccgggcgcgcatcctgaa
atgcgtgcggttgaaccgctgttgcggattcaggagcaggccagcgtgctgcccgcgcgt
ggacggctggtcgccgaacgcattggcacgcgccgcggcatgcacctgttcctgtttccc
tttgccggccgcgcggtgcatgaaggcatggcggcgatgatcgcgttgcgctggggccgg
cagcatgccaataccttttcctacaccgtgaatgactacggcctgatgttgacgctggcc
gagccggccgcaattgacgatcggctgctgcggcaattgctcagtccggaaaacatggcc
gacgacctgcgccatggcgtgaacctgggcgaacttgcacgccgtcagtttcgggaaatt
gcgcgcgtggcgggtttgctgacgccgtctttgcccggacgcgcggcgcgctcattgcgt
caagtgcaggcatccagcggcttgctgtacgacgtgctgcgccgctacgaccccggccat
ctgttgctggcgcaggcagagcgcgaagtgtttgagttccagctggaagccccccggctg
atggctgcattgcaagattgccatggacggacgctagcgttatgtgagccacaggcgctt
acccccctgtcatttcccttatggacggaaagcctgcgcggccagctcagtaccgaaacc
tggcaagcgcgtgtcaagcgcgccgccgctcaactggagaagcgctatgcccgagttgca
tga

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