Achromobacter seleniivolatilans: RAS12_07220
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Entry
RAS12_07220 CDS
T09953
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
asel
Achromobacter seleniivolatilans
Pathway
asel00362
Benzoate degradation
asel00624
Polycyclic aromatic hydrocarbon degradation
asel01100
Metabolic pathways
asel01120
Microbial metabolism in diverse environments
asel01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
asel00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RAS12_07220 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
RAS12_07220 (pcaH)
Enzymes [BR:
asel01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
RAS12_07220 (pcaH)
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Gene cluster
GFIT
Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
CarbopepD_reg_2
DUF4198
SdrD_B
NOMO1-like_2nd
SpaA
Motif
Other DBs
NCBI-ProteinID:
WMD22160
UniProt:
A0ABY9M5D2
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All DBs
Position
1613724..1614425
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AA seq
233 aa
AA seq
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MTHLAQYRRPFWNTQPGYRFDPYGSTQLRSPNEALIVVPQTLSEITGPAFGAAFVRQGDN
DLTRVASADAIGERIIVSGRVLDENGRPVPDALIEIWQANAAGRYLHKRDQHDAPLDPNF
RGEGRTVTDAQGRYQFKTIKPGAYPWGNHYNGWRPQHIHFSLFGRAYATRLVTQMYFPGD
PLLEFDPIFQCIQDVKARNRLIATLDWETTVPEYALGYRFDIVLRGRNATPLE
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgacccatcttgctcaataccggcgccctttctggaacactcagcccggctaccggttc
gatccctacggctccacacaactgcgctcgcccaacgaagccctgatcgtcgtaccgcag
accttatctgaaattacgggaccggccttcggcgccgcgtttgtcaggcaaggcgacaac
gacttgacgcgtgtggcaagcgccgacgcgatcggagaaagaatcattgtgtcgggccgc
gtcctggacgaaaacggccgcccggtccccgatgcgctgatcgaaatctggcaggccaac
gccgcaggccgctatttgcacaagcgcgatcagcacgacgctccgcttgatcccaacttc
agaggtgaaggcaggacggtcaccgatgcgcagggccgctaccagttcaagacgatcaag
cccggcgcctatccctggggcaatcactacaacggatggcgcccgcaacacatccacttt
tccttgtttggccgcgcctatgccacgcgcctggttacgcagatgtacttcccgggcgat
cctttgctggagttcgaccccatcttccagtgcatccaggacgtcaaggcgcgcaaccgg
ctgatcgcgacgctcgattgggaaaccaccgtgcccgaatacgcgctgggctaccgcttc
gatatcgtgctgcgcggccgcaacgcgaccccattggagtaa
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