Achromobacter seleniivolatilans: RAS12_14155
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Entry
RAS12_14155 CDS
T09953
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
asel
Achromobacter seleniivolatilans
Pathway
asel03030
DNA replication
asel03410
Base excision repair
asel03420
Nucleotide excision repair
asel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RAS12_14155 (polA)
03410 Base excision repair
RAS12_14155 (polA)
03420 Nucleotide excision repair
RAS12_14155 (polA)
03440 Homologous recombination
RAS12_14155 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asel03032
]
RAS12_14155 (polA)
03400 DNA repair and recombination proteins [BR:
asel03400
]
RAS12_14155 (polA)
Enzymes [BR:
asel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RAS12_14155 (polA)
DNA replication proteins [BR:
asel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RAS12_14155 (polA)
DNA repair and recombination proteins [BR:
asel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RAS12_14155 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RAS12_14155 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WMD23465
LinkDB
All DBs
Position
complement(3139797..3142514)
Genome browser
AA seq
905 aa
AA seq
DB search
MKKTLLLVDGSSYLYRAFHAMPDLRNAQGEPTGALYGVVNMLRKLVSDHKAEYAACIFDA
RGKTFRDDLYPEYKSHRPPMPEDLAAQIEPIHRAVRALGWPVLAIEGVEADDVIGTLAKR
AAEQDVHTIVSTGDKDLAQLVNSHVTLVNTMTGEVLDEPGVVNKFGVPPDRIVDYLMLVG
DTVDNVPGVTKVGPKTAVKWLSEFGSIDKLVENADGIKGVAGSNLREAMPNFPLTRQLLT
VKYDCDLAGHVETVDDLTPRERDDATLTELYERYGFRTWLRDLTGDTERVPTGDARIAAE
APAAPTEVDYRIISDWTEFDAWVERLKDAPLAALDTETTSLDQMQAKLVGLSLSVKPGVA
CYIPVAHRGPDNAPQLPKAEVLARLKPWLEDASRAKLLHHAKYDTHVFANEGIKLAGVTD
DTMLQAYVLESHRGVGLTELAQRYLGRSGVSYEDLCGKGAKQIGFDEVAVDKAGHYAAED
ADFTLQLHQVLRPMVSADEGLNRIYLLEMQVSAVLTTIERNGVKVDAAELGRQSHKLGQE
MLLLEQKAYELAGQPFNLNSPKQLGEILFGRMQLPVVRKTASGAPSTDEDVLSKLALDYP
LPQVLLEYRGLSKLKSTYTDKLPRMINPDTGRVHTRYAQAAVITGRLASSDPNLQNIPVR
TEAGRRVREAFIAEQGLLLSADYSQIELRIMAHVSDDANLQRAFAAGEDIHRATASEVFG
VSLENVTSEQRRAAKAINFGLIYGMGVFGLASNLGITRDAAQAYIDRYFARYPGVAMYMD
DTRRLAREQGYVETVFGRRLQLPEIRGASGPRRQGAERAAINAPMQGTAADLIKMAMVAV
QDWLEAEKLQTRMIMQVHDELVLETPDAELELVKEALPRLMCNVAELRVPLVAEVGMGKN
WEQAH
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccttattactggtcgacgggtcaagttacttgtaccgcgctttccacgct
atgcctgatttgcgcaacgcgcaaggcgaacccacgggtgcgctctacggcgtggtgaat
atgttgcgcaagctggtatctgaccataaggcagagtatgccgcatgtatattcgatgct
cgcggcaagacgtttcgggacgatttgtatccggaatataaatcgcaccgcccccccatg
ccggaagacctggcagcacaaatcgagcccatccatcgcgccgtgcgggcgctgggctgg
ccggtgctggcgatcgaaggcgtagaagctgatgacgtgatcggcacgctggccaagcgg
gctgccgagcaggacgtgcacaccatcgtctcgacaggcgacaaggatctggcccagttg
gtcaacagccatgtcacgctcgtcaacaccatgacaggcgaagtgctggacgagcccggc
gtcgtcaacaaattcggcgtgccgcccgaccgcatcgtggactacctgatgctggtgggc
gataccgtggataacgtacccggcgtaaccaaggtcggtcccaagacggcggttaaatgg
ctgtcggaattcggttcgatcgacaagcttgtcgaaaacgccgacgggatcaagggcgtg
gccggcagcaatctgcgtgaagccatgccgaattttccgctgacgcgccaactgctgaca
gtgaagtacgactgcgatctggccggccacgtggaaaccgtggacgatctgacgccgcgt
gaacgcgacgacgccacgctgactgaactgtatgaacgttacgggttccgcacctggctg
cgtgacctgacgggcgacactgagcgcgtgcccacgggcgatgcgcgaatcgctgccgag
gcgcccgcggccccgaccgaagtggactaccgcatcatttccgactggaccgaattcgac
gcctgggtcgagcgactgaaggacgcgccgctcgcggcgctggataccgagaccacatcg
cttgatcagatgcaggccaagctggtgggcctgtcgctgtcggtaaaacctggcgtcgcc
tgctatatcccggtagcccatcgtggtccggacaacgccccgcaattgcccaaggccgag
gtgctggcccgcctgaagccgtggctggaagacgcctcccgcgccaagctgctacatcac
gccaaatacgacacgcatgtgttcgccaacgaaggcatcaagctggcgggcgtgactgac
gacacgatgctgcaagcctacgtgttggagtcgcatcgcggcgtgggcctgaccgagctg
gcgcagcgctatctgggccgcagcggagtgtcctacgaggacctttgcggcaagggcgcc
aagcagatcggctttgatgaagtcgccgtcgacaaggcggggcactacgccgcggaagac
gcagacttcaccttgcagctgcatcaggtgctgcgcccgatggtgtcggcggacgaaggg
ttaaatcgcatctatctgcttgagatgcaggtctcggcagtgctgaccaccatcgagcgc
aacggcgtcaaggtggacgcagcggaattggggcgccagagccacaagctgggccaggaa
atgctgctgctggaacagaaggcctatgaactggccgggcagcccttcaatctgaattcg
cccaagcaattgggtgaaatcctgttcgggcgtatgcagttgccggtggtccgcaagacc
gcaagcggcgcgccgtctaccgacgaagacgtattgagcaagctggcgctggactatccg
ctgccccaggtgctgctggaataccgcggcctgtccaagctgaagtccacctacacggac
aagctgccgcgcatgatcaaccccgatacggggcgtgtgcatacgcgttatgcgcaagcc
gcggtcatcaccggccgcttggcatcgtcggaccccaatctgcagaacatcccggtgcgc
accgaggccggacggcgcgtgcgcgaggcgttcatcgccgagcagggcttgctgctgtcg
gcggactattcgcagatcgaactgcgcatcatggcgcacgtgtccgatgacgccaacctg
caacgcgcttttgccgcaggcgaggacattcaccgggcgaccgcgtcggaagtgtttggg
gtgtctctggaaaacgtgacgtctgaacagcgccgtgccgccaaggccatcaatttcggt
ctgatctacggcatgggcgtgtttggactggcgtctaacctgggcatcacgcgtgatgcg
gcgcaggcctatatcgaccgctatttcgcccgttatcccggcgtggcgatgtatatggac
gatacccgccgcttggcgcgcgaacagggttacgtggaaaccgttttcggacgccggctg
caactgccggagatccgcggcgcctcgggtccgcgccggcaaggcgccgaacgcgcggcc
atcaatgcgcctatgcagggcacggcggccgacttgatcaagatggcgatggtggcggtg
caggattggctggaagccgagaaactgcaaacccgcatgatcatgcaggtccacgatgaa
ctggtgctggaaacgcctgacgccgagcttgaactggtcaaggaagccctgccgcgcttg
atgtgcaacgtggctgaactgcgcgtgccgctggtggccgaggtaggcatgggcaaaaac
tgggaacaggctcactga
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