Achromobacter seleniivolatilans: RAS12_14185
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Entry
RAS12_14185 CDS
T09953
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
asel
Achromobacter seleniivolatilans
Brite
KEGG Orthology (KO) [BR:
asel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asel03016
]
RAS12_14185 (truB)
Enzymes [BR:
asel01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RAS12_14185 (truB)
Transfer RNA biogenesis [BR:
asel03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RAS12_14185 (truB)
Prokaryotic type
RAS12_14185 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WMD23470
LinkDB
All DBs
Position
complement(3147974..3148726)
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AA seq
250 aa
AA seq
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MAKRRGLVLDGVLLLDKPVGLSSNHALQRAKRAMDAAKAGHTGTLDPFATGLLVCCMGRA
TKIAGAMLNADKAYRATLQFGSETDSGDLTGNVVSTAEPGFTVEEQALRDALSRFSGTIE
QIPPMYSALKRDGKPLYEYARAGIELERAPRQITIHRIELLSFNGTQAEIDVACSKGTYI
RTLAQDIGRVLGCFAHLTALRRTHVGPFSLERAVELEALQAMPDPKQALLALNELPEGLL
PSTLTLKDSL
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacgacgcgggcttgtgctcgacggtgtgctgttgctcgacaaacccgtaggt
ttgtcgagtaatcacgctttgcagcgcgccaaacgtgccatggatgcggcgaaagccggt
cacacgggcacgctggacccctttgccaccggcttgctggtgtgctgcatgggacgagcc
actaaaattgctggcgcgatgttgaatgccgacaaggcatatcgcgctacgctgcaattt
ggcagcgaaactgattcaggcgacctgaccggcaatgtcgtatcgaccgccgaaccaggt
tttaccgtagaggaacaagcactgcgcgacgcgctgtcacgtttctcgggcacgatcgag
cagattccgccgatgtactccgcgctcaagcgcgacggcaagccgttgtacgagtacgcg
cgcgctggcattgagctggaacgcgcgcctcgccagatcacgattcaccgcatcgaactg
ttgtcctttaacgggacgcaggcagagatcgatgtggcatgtagtaaaggcacatacatc
cgaacactggcccaggacatcgggcgcgtgctgggctgtttcgcccacctgacggcgctg
cggcgcacgcatgtcgggccattttctctggaacgcgccgttgaactggaggccttgcag
gctatgccagaccctaagcaggcattgcttgcactgaacgaattgccggagggcttgctg
ccctccaccctgaccttaaaggactcgctatga
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