Achromobacter seleniivolatilans: RAS12_15590
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Entry
RAS12_15590 CDS
T09953
Name
(GenBank) uracil-DNA glycosylase family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
asel
Achromobacter seleniivolatilans
Pathway
asel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
asel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RAS12_15590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asel03400
]
RAS12_15590
Enzymes [BR:
asel01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RAS12_15590
DNA repair and recombination proteins [BR:
asel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RAS12_15590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WMD18077
LinkDB
All DBs
Position
complement(3461590..3462558)
Genome browser
AA seq
322 aa
AA seq
DB search
MSLPSTAPAPAAPRVNPLQRIWLRELGMERLWLRPAPVAARVAVDAQAVVSKTVLPVATS
VQAAPVAEASPPPVATAAVAEVRAESRSEAPAAPASGRQAIPASILTRTGPPPRPEPKVV
ADDTASAPRIPVAEAVKNANLDELREQVVACTACGLCQGRRHAVFGQGATPTRWLVVGEA
PGEQEDRQGHPFVGRSGQLLDSMLAAVGMSREKDVFITNVIKCRPPGNRNPKPEEIAACS
PYLMRQIALLKPERILVLGRFAAQTLLGTDATIGNLRGRLHSLKTEEGTEIPVVVSYHPA
YLLRSPSEKARAWQDLKLAAQQ
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgccctcaacagctccggcgcccgccgcgccgcgcgtcaatcccctgcagcgc
atctggctgcgggagctaggcatggagcggctgtggctgcggcctgcgcccgttgccgct
cgtgttgccgtggatgcgcaagccgttgtttccaaaacagttttgccggttgctacatcg
gttcaagcggcaccggtcgcagaagcctcaccgccgcccgtggcaacggccgccgtggcc
gaggtccgggcagaatccaggtccgaggctccggcagcccctgcctcggggcggcaggca
atacccgcctcaatcttgacgcgcaccggtccgccgccgcgtcccgaacctaaggtggtc
gcggacgatacggcttccgcgccgcgtattcctgtggccgaagcggtcaagaacgccaat
ctggacgaattgcgcgaacaggtggtggcgtgcacggcctgcggactgtgccagggccgc
cgccacgcggttttcgggcagggcgcgacgcctacccgctggctggtcgtgggcgaggcc
ccaggcgagcaagaggaccgccagggtcatccgtttgtggggcgttcagggcagttgctg
gattccatgctggcggcggtgggcatgagccgcgagaaagacgtgttcatcacgaacgtg
atcaagtgccgtcccccgggcaatcgcaaccccaagcccgaggaaatcgccgcgtgcagc
ccgtacctgatgcggcagatcgcgctgctcaagcccgagcgcattttggtgttgggccgt
tttgcggcgcagacgctgttgggcacggatgccacgatcggcaacctgcgcggccggctc
cattctttgaagacggaagagggcacagagattccggtggtcgtgagctatcacccggcc
tatctgctgcgcagtccatccgagaaggcgcgcgcctggcaggatctgaaactggcggcg
cagcaataa
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integrated database retrieval system
