Achromobacter seleniivolatilans: RAS12_16320
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Entry
RAS12_16320 CDS
T09953
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
asel
Achromobacter seleniivolatilans
Pathway
asel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RAS12_16320 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asel03019
]
RAS12_16320 (pnp)
03016 Transfer RNA biogenesis [BR:
asel03016
]
RAS12_16320 (pnp)
Enzymes [BR:
asel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RAS12_16320 (pnp)
Messenger RNA biogenesis [BR:
asel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RAS12_16320 (pnp)
Transfer RNA biogenesis [BR:
asel03016
]
Prokaryotic type
tRNA degradation factors
RAS12_16320 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
KH_SLS1_2
DUF5813
Motif
Other DBs
NCBI-ProteinID:
WMD18215
LinkDB
All DBs
Position
complement(3635733..3637895)
Genome browser
AA seq
720 aa
AA seq
DB search
MFNKVTKSFQYGQHTVVLETGEIARQASGAVVVSIEDTVVLATVVASKKAKPGQTFFPLT
VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPLRPLFPEDFYNEVQVVIHTLSV
NPEIDPDIAAMIGASAALAISGIPFNGPIGAARVGYIDGQYALNPTASQLKSSKLDLVVA
GTENAVLMVESEAQQLSEEIMLGGVVFGHQQMQAVINAIHELVKDAGKPDWDWQAPAKNE
ALIAAVTSAAQEGLNAAYQIREKQARTAKLREVSSDVSAKLAAAAAEKGEALPDAVTVDN
IMFSLESAIVRGQILNGEPRIDGRDTRTVRPISVRLGVLPRAHGSALFTRGETQALVIAT
LGTKQDEQIIDALMGEYRDRFMMHYNMPPFATGETGRIGVPKRREIGHGRLAKRSLIPLL
PAPEDFQYTIRIVSEITESNGSSSMASVCGGSLAMMDAGVPVKDHVAGVAMGLILDGGKF
AVLTDILGDEDHLGDMDFKVAGTENGVTALQMDIKIQGITKEIMQVALAQAREGRLHILT
KMKEALDGSRGELSAFAPRMLTIKINPEKIRDVIGKGGATIRALTEETGTQIDISDDGTI
VIASVDEAQAKEAQRRIVELTADVEVGQIYEGSVLRLLDFGAIVQVLPGRDGLLHISEIA
NYRIANINDVLKVGQQVRVKVIEADDKGRLRLSIKAIGGIEAQQPAAAPEAAPQSEPQAE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaagtgacaaaatcgttccaatacggccagcacacggtcgttctggaaact
ggcgagatcgctcgtcaggcctccggcgccgttgtggtgtcgattgaggacaccgtcgtc
ctggccaccgttgtggcttccaagaaggccaagccgggtcaaacgtttttcccgctgacc
gtcgactacatcgagaagacctacgccgccggccgtattccgggcgggttcttcaagcgt
gaaggcaagccgtccgaaaaggaaacgctgacctcgcgcctgatcgatcgtccgctgcgt
ccgctgttccccgaagacttctacaacgaagtccaagtggtcatccacacgctgtcggtc
aatcctgagattgatcccgacatcgccgccatgatcggcgcctcggccgctctggctatc
tcgggcatcccgttcaatggccccatcggcgccgctcgtgtgggctacatcgatggccaa
tacgcgctgaacccgaccgcctcgcaactgaagtcgtccaagctggacctggttgtggcc
ggtacggaaaacgccgtcctgatggtggaatcggaagcccaacagctgtccgaagaaatc
atgctgggtggtgtggttttcggtcaccagcaaatgcaggctgtcatcaacgccattcac
gaactcgtgaaggacgctggcaagcccgattgggactggcaagctccggccaagaacgaa
gccctgatcgccgccgtgacctcggctgcccaggaaggcctgaacgccgcctaccagatt
cgcgaaaagcaagcccgtaccgccaagctgcgcgaagtgtcgtccgacgtgtcggccaag
ctggctgccgccgctgctgaaaagggcgaagcgctgcctgacgccgttaccgtcgacaac
atcatgttctcgctggaatcggccattgtccgcggtcagatcctgaacggcgaaccgcgt
atcgacggtcgcgacacgcgcaccgtgcgccccatcagtgtccgtctgggcgtgttgccc
cgcgcgcacggcagcgcactgttcacccgtggtgaaacgcaagcactggttatcgctacg
ctgggcaccaagcaagacgaacaaatcattgatgcgctcatgggcgagtaccgtgaccgc
ttcatgatgcactacaacatgcctccgttcgccaccggcgaaacgggccgcattggtgtg
cccaagcgccgcgaaatcggccacggccgtctggccaagcgctctctgatcccgctgctg
ccggctcctgaagatttccagtacacgatccgtatcgtgtcggaaatcactgagtcgaac
ggctcgtcgtcgatggcttcggtctgcggcggctcgctggcaatgatggacgccggcgtg
ccggtcaaggatcacgtggcgggtgtggccatgggtctgattctggacggcggcaagttc
gctgtgctgacggacattctgggcgacgaagatcacctgggcgatatggacttcaaggtt
gcgggcaccgaaaacggcgtcaccgcactgcagatggacatcaagatccagggcatcacg
aaggaaatcatgcaagtggcgctggcgcaagcccgcgaaggccgcctgcacatcctgacg
aagatgaaggaagccctggacggttcgcgtggcgagctgtcggctttcgctccgcgcatg
ctgaccatcaagatcaaccccgagaagatccgcgacgtgatcggtaagggcggcgccacc
atccgcgcgctgaccgaagaaaccggcacgcagatcgatatctctgacgacggcacgatc
gtgatcgccagcgtcgacgaagcgcaggccaaagaagcccagcgccgcatcgtcgaactg
accgccgacgtcgaagtgggccagatctacgaaggctcggtcctgcgtctgctggacttc
ggcgccatcgtgcaagtgctgccgggccgtgacggtctgctgcacatctcggaaatcgcc
aactaccgcatcgcgaacatcaacgatgtgctgaaggtcggccagcaagtccgcgtcaag
gtcatcgaggccgacgacaagggccgtctgcgcctgtccatcaaggcaatcggcggcatc
gaagcgcagcaacccgctgccgctcccgaagcagccccccagtcggaaccgcaagctgaa
taa
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