Achromobacter seleniivolatilans: RAS12_17165
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Entry
RAS12_17165 CDS
T09953
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
asel
Achromobacter seleniivolatilans
Pathway
asel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RAS12_17165 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asel03019
]
RAS12_17165 (recQ)
03400 DNA repair and recombination proteins [BR:
asel03400
]
RAS12_17165 (recQ)
Enzymes [BR:
asel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RAS12_17165 (recQ)
Messenger RNA biogenesis [BR:
asel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RAS12_17165 (recQ)
DNA repair and recombination proteins [BR:
asel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RAS12_17165 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
WMD18369
UniProt:
A0ABY9LUA4
LinkDB
All DBs
Position
3808913..3810742
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AA seq
609 aa
AA seq
DB search
MSDARALGVLQRVFGYESFRGDQQAIVEQVIDGGDALVLMPTGGGKSLCYQIPSLVREGT
GIVVSPLIALMQDQVDALTELGVRAAFLNSTQDWRVARDVEQAFLAGELDLLYVAPERLL
TDRCLQLLERGRIALFAIDEAHCVSQWGHDFRPEYLGLSMLHERWPDVPRIALTATATAD
TRTEIAQRLSLDDARHFVSSFDRPNIRYRIIEKNEVRKQLLEMIRTEHDGESGVVYGLSR
ARVEETAEFLCNQGIDAMPYHAGLSPQVRAANQSRFLREDGVVMVATIAFGMGIDKPDVR
FVAHIDLPKSVEGYYQETGRAGRDGQPATAWLAYGLQDVVQQRRMIDESPGDESYRRRLG
QQLDAMLGLCETVECRRVRLLAYFGQQITACGNCDVCLEPPQAWDGTVAAQKVLSAVYRL
WKERGQRYGAGHIIDILRGKVTDRTKQHGHETLSVFGVGEDLSDTAWRGVLRQLLAQGLL
TVDNEGFGTLALTEGSRAVLKGERQLMLRRESEKKTRAGKTSSGRPKPAAIDLPSELQPV
FEALRAWRGEVAKSHGVPAYVIFHDATLREIALAQPDSMDALSHISGVGARKLEAYGEEI
LQRVARPVL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcgcgcgccctcggcgtattgcagcgcgttttcggttacgaatccttccgc
ggcgaccagcaagccattgtcgaacaggtgatcgacggcggcgacgcgctggtcctcatg
cccactggcggcggcaaatcgctgtgctatcagattccgtcactggtccgggaaggcacc
ggcatcgtcgtgtcgccgctgattgcgctgatgcaggaccaggtagacgcgctgaccgaa
cttggcgtacgcgcggcattcctgaactccacgcaagactggcgcgtggcccgcgacgtc
gaacaggcgttcctggcgggcgagctggacttgctgtatgtcgcccccgaacgcctgctg
accgaccgctgcctgcaactgctggagcgcggccgcattgccctgttcgccattgatgaa
gcgcattgcgtatcccaatggggtcacgacttccgcccggagtatctgggcctgtccatg
ttgcacgagcgctggccggatgtgccgcgcattgcgctgacggccacagccacggctgac
acacgcaccgaaatcgcccagcggctgtcgctggacgacgcgcgtcacttcgtgtccagc
ttcgaccgccccaacatccgctaccgcatcatcgaaaagaacgaagtgcgcaagcagttg
ctggagatgatccgcactgaacacgatggcgaatccggcgtggtgtacggcctgtcgcgc
gcccgtgtcgaagaaaccgctgaattcctgtgcaatcaaggcatcgacgccatgccgtac
cacgcgggactcagcccgcaggtgcgtgccgccaaccagtcccgcttcttgcgggaagat
ggcgtggtcatggtggccaccattgcctttggcatgggcatcgacaagcccgatgtgcgc
tttgtcgcccacatcgacctgcccaagtccgttgaaggttattaccaggaaaccggccgc
gccggccgcgacgggcagcccgccacggcctggctggcctatggcctgcaagacgtggtg
cagcaacgccgcatgatcgacgagtctcccggagacgaatcctaccgccgccgccttggc
cagcagttggacgccatgctggggctgtgtgaaaccgtggaatgccgccgcgtgcgcctg
ctggcttatttcggccagcagatcacggcttgcggcaactgcgatgtctgtctggaaccg
ccgcaagcctgggacggcaccgtggccgcgcaaaaagtgctgtcggccgtctaccgcttg
tggaaagaacgcggccagcgttacggcgcgggccacatcatcgacattctgcgcggcaag
gtcacagaccgcaccaaacagcatggccatgaaacgctgagcgtgtttggcgtgggtgaa
gatctgagcgataccgcctggcgcggcgtgttgcgccaattgctggcgcagggcctgctg
acggtggacaacgaagggttcggcaccctggcgttaaccgaaggcagccgggccgtgctc
aagggcgaacggcaattgatgctgcgcagggaatccgaaaagaaaacacgcgcgggcaag
accagcagcggccgccccaaaccggccgccatcgacctgccctccgaattgcagcctgtg
ttcgaagcgctgcgcgcgtggcgcggcgaagtcgccaagagccatggggtgccggcctac
gtcatcttccatgacgcgacgctgcgcgaaatcgcgctggcccagccagattcgatggat
gcgttaagccacatcagcggcgtgggcgcacgcaagctggaagcctacggcgaagaaatc
ctgcaacgcgtcgccagaccggtactgtag
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