Achromobacter seleniivolatilans: RAS12_17960
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Entry
RAS12_17960 CDS
T09953
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
asel
Achromobacter seleniivolatilans
Pathway
asel00061
Fatty acid biosynthesis
asel00071
Fatty acid degradation
asel01100
Metabolic pathways
asel01212
Fatty acid metabolism
asel02024
Quorum sensing
asel04146
Peroxisome
Module
asel_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
asel00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RAS12_17960
00071 Fatty acid degradation
RAS12_17960
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RAS12_17960
09145 Cellular community - prokaryotes
02024 Quorum sensing
RAS12_17960
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
asel01004
]
RAS12_17960
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asel04147
]
RAS12_17960
Enzymes [BR:
asel01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RAS12_17960
Lipid biosynthesis proteins [BR:
asel01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RAS12_17960
Exosome [BR:
asel04147
]
Exosomal proteins
Exosomal proteins of breast milk
RAS12_17960
Exosomal proteins of breast cancer cells
RAS12_17960
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Ortholog
Paralog
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Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
WMD18523
UniProt:
A0ABY9LX11
LinkDB
All DBs
Position
complement(3988381..3990084)
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AA seq
567 aa
AA seq
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MTRPWLAHYPQGVPAEISTEGYSSLADLLDRACKQYASRIACTAMGSDITYAQLDQHARA
FSGWLQSLGLPKGSRVALMMPNVPAYLVGMLATLRTGLVVVNVNPLYTADELERQLQDSG
ASVILILENFAHTLQNVKNRGQLKHIVVTGPGDLLGGLKAPVVNFAARYIKKIVPAWQID
GAHTLPAVLREGARLPFNPPSLTMDDLAVLQYTGGTTGVPKGAMLSHRNLAANVLQTEAV
AQPVVHDLAQTQLTIISALPLYHVFAMTVCGLYGLHAGMRNVLIINPRDQPSLINAWRKV
PINLFPGVNTLFNALAHNADFARLDFSALRLTLGGGMAVQQSVAERWLKITGRPLIEGYG
LSETSPVATVNPTDATAYSGSIGLPLPSTDVAILDDAGHEVPLGERGEVGIRGPQVMLGY
WQKPEETRQSMTEDGYFRTGDIGIMDDKGYTRIVDRKKDMIAVSGFKVYPNEVEAVVAQL
PGVLECAAIGVPDEHSGEAVKVFVVKSDPSLTEAQVQDWCREKLTGYKRPRFVEFREELP
KSNVGKILRRELRPDAPAAAPAAAANG
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtccgtggcttgcccattacccgcagggggttccagccgagatctccaccgag
ggttattcctcgctggccgacttgctggaccgggcctgcaagcagtacgcatcgcgcatc
gcctgcacggccatgggcagcgacatcacctatgcgcaattggatcagcatgcgcgcgca
ttttcaggctggctgcaaagcctgggcctgcccaaaggctcgcgcgtggcgctgatgatg
ccgaacgtgccggcctatttggtcggcatgttggccacgttgcgcacgggactggtcgtg
gtgaacgtgaacccgctctacaccgcagacgagcttgagcgccaattgcaggacagcggc
gcatccgtcattttgatcctggaaaacttcgcgcatacgttgcagaacgtgaagaatcgc
gggcagctcaaacacatcgtggtgacagggcctggcgatctgctgggtggcctgaaagcg
ccggtggtcaactttgccgcccgctacatcaagaaaattgtgcctgcctggcagatcgac
ggcgcgcacacgttgcccgccgtgctgcgtgagggcgcgcgcctgccattcaatccgccg
tcattgacgatggacgatctggcggtgctgcaatacaccggcggcaccaccggcgtgccc
aagggcgcgatgctgtcgcaccgcaacctggcggccaacgtgttgcagacggaagcggtg
gcgcaacccgtggtgcacgatctggcgcaaacccagctcaccatcatcagcgcattgccg
ctgtatcacgtgtttgcgatgacggtctgcggtctgtatggcctgcatgcgggcatgcgc
aatgtgctcatcatcaatccgcgtgatcagccttccttgatcaatgcgtggcgcaaggtg
cccattaatttgttccctggcgtcaatacgctgtttaacgccctggcgcataacgcggat
tttgcccggttggatttttccgccttgcgcttgaccttgggcggcggcatggccgtgcag
cagtctgtggccgaacgttggctgaagatcaccggcaggccgctgattgaaggttatggc
ttgtccgagacctcgcccgtggcaacggtgaaccccaccgacgccacggcatattccggg
tctattggtctgccgctgccgtctaccgatgtggctatcttggatgacgcggggcacgag
gtgccgctgggtgagcgcggcgaagtgggcatccgggggccgcaggttatgttgggatac
tggcaaaagcccgaggaaacacggcagtccatgacggaagacggatacttccgcacgggc
gacatcggcatcatggacgacaagggctacacacgcatcgtggaccgcaaaaaggacatg
attgcggtgtcgggcttcaaggtttatccgaacgaggtcgaggccgttgtggcgcagttg
cccggcgtgctggaatgcgcggcaattggcgtgccggatgaacactccggagaagcggtc
aaagtgttcgttgtgaaaagcgatccgtcgctgaccgaggcccaggtgcaggattggtgc
cgggaaaagctgacgggctataagcgcccgcgctttgtggaattccgtgaagaactgccc
aagagcaatgtgggcaagattctgcgccgtgaattgcgtcccgacgcacccgctgcggcg
cctgctgctgcggcaaatgggtag
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