Achromobacter seleniivolatilans: RAS12_18085
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Entry
RAS12_18085 CDS
T09953
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
asel
Achromobacter seleniivolatilans
Pathway
asel00470
D-Amino acid metabolism
asel00550
Peptidoglycan biosynthesis
asel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
asel00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RAS12_18085 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RAS12_18085 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
asel01011
]
RAS12_18085 (murD)
Enzymes [BR:
asel01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RAS12_18085 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
asel01011
]
Precursor biosynthesis
Amino acid ligase
RAS12_18085 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
Sulfotransfer_4
Motif
Other DBs
NCBI-ProteinID:
WMD18545
UniProt:
A0ABY9LV56
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Position
complement(4016782..4018314)
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AA seq
510 aa
AA seq
DB search
MNTMETSHADAPLVLILGLGETGVAAARWSARLGARLRVADTRVAPGGLEALRSALAQNE
VEYRLGCDASFDVALLDGVNQVVLSPGLIPTQAPAADLLREAEARGIEVVGEIELFARAL
ADLAETREYRPRLLAVTGTNGKTTVTALTRELIDASGLSVVAAGNISPAALTALMDALDG
DALPQVWVLELSSFQLETTHSLMADAAVVLNVSQDHLDWHGSMDAYVQAKARLLKMARIA
IVNRDDAYTLDMVPAVNALNVRTFGRDMPELVGDMGLELGQGVAWLVASEPSDFYEPPAP
VRRKKDAPEPVRANGRMSRLMPVDALRIRGIHNALNALAALQLARCLDLGWGAMLRALRD
YAGEPHRAAFVRQIGGVDYINDSKGTNVGATVAALEGLGQPVVLIAGGEGKGQDFSPLIP
VVSRHARAVMLIGVDGPEIGRVLASTGVNCVAADSLHAAVRGAAELAQPGDAVLLSPACA
SFDMFRNYPHRGQVFVEEVEDLARDRGEVA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgatggaaacctctcacgctgacgcgccgcttgtcctgatccttggattgggc
gagacgggtgtcgccgccgctcgctggagcgcccgcctgggcgcccgcttgcgtgtggcc
gatacgcgcgtggcgccgggagggctagaagcgttgcgcagtgcgttggcgcaaaacgaa
gtggaataccgcttgggttgcgacgcgtcttttgacgtggcgctgctggatggcgtgaat
caggtggtgctgagtcctggcctgattccgactcaggcgcctgctgccgacctgctgcgc
gaggctgaagcccgcggcattgaggttgtgggcgaaatcgaattgtttgcacgcgcgctg
gccgatctggctgaaacgcgcgagtaccgtccgcgcctgcttgccgtgaccggaaccaac
ggcaagaccaccgtgacggctctgacgcgcgagctgattgacgcaagcggcttgtcggtt
gtggcggccggaaatatcagccccgccgcgttgaccgcgctgatggatgctctggacggc
gacgcgttgccgcaggtttgggtgttggaactgtccagcttccagttggaaacgacgcat
tcgctgatggcggacgcggccgtagtgctgaatgtttcgcaagaccatctggactggcat
ggcagcatggatgcctatgtgcaggccaaggcgcgactgctgaagatggcgcgcatcgcg
atcgtgaatcgcgacgatgcgtacacgctggacatggtgccggcggtgaacgcgctgaat
gtgcgcacctttggccgcgacatgcccgaattggttggcgacatgggcctggaattgggg
cagggcgtggcctggctggtcgcatccgaacctagcgatttttatgaaccgccggcccct
gtgcgccgcaagaaggatgcgccggaacccgttcgcgccaatggacgcatgagccgcctg
atgccggtggatgctttacgcattcgcggcatacacaatgccttgaatgcgctggctgcc
ttgcaactggcccgttgcctggacttgggctggggcgccatgttgcgcgccttgcgcgat
tacgccggcgaaccgcatcgcgcggcgtttgtgcgccagattggcggcgtggactacatc
aacgacagcaaaggcacgaacgtgggcgccaccgtggctgccctggaaggcctgggtcag
ccggtggtgttgatcgcgggcggtgaaggcaagggccaggacttttccccgctgattcct
gtggtgtcgcgccatgcgcgcgccgtgatgctgattggggtggacggccctgagattggc
cgcgtgctggcgtctacaggcgtcaattgcgttgccgccgattccctgcatgccgctgtg
cgaggcgcggccgagctggcgcagcccggcgatgccgtgttgctgtcgcccgcttgcgcc
agtttcgatatgttccgcaattacccgcatcgcgggcaagtgttcgtggaagaggtcgag
gatctggcgcgcgaccgtggagaggtggcatga
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