KEGG   Achromobacter seleniivolatilans: RAS12_21060
Entry
RAS12_21060       CDS       T09953                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
asel  Achromobacter seleniivolatilans
Pathway
asel02020  Two-component system
asel02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:asel00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RAS12_21060 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    RAS12_21060 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:asel03021]
    RAS12_21060 (rpoN)
Transcription machinery [BR:asel03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     RAS12_21060 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: WMD19097
UniProt: A0ABY9LZP0
LinkDB
Position
complement(4680775..4682220)
AA seq 481 aa
MQNIVPMTRPILELRPGQHLTLTPQLQQSIRLLQLSTLDLEAEISQVLADNPLLERDDET
PAAEAQAESERESSVQDDEPAAERESPVDEMPGSGGVYSDDDSSLPEAARPDTLREYLLG
QLVLTRAAPRDAALASLLIDELDENGYLGSPLDEILSWLPAELEPDIDELRAALSLLQSF
DPVGIGARDMAECLLLQLRNPDLTRLPEAADPAVLACARVVCAQHLPLLATGNAARLCAA
VGCDEATWRVAHSLILRLEPRPGRAWTVPAADYAVPDVIVRKTRRGWQVTLNSAAVPRLQ
INGLYAQMLGNQKESAHAGLQSQLQQAKWMIRNVEQRFDTILRVAQAIVERQTAFFSQGP
VAMRPLILKDIAGELGMHESTISRATTQKYMLTPFGTLELKRFFGAGVSTDGGDATSATA
VQTFIRQMVADENRAKPLSDSQIMQKLADQGIVIARRTVAKYREALRIAPATLRKAQASA
R
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgcaaaatattgtacctatgacccgtccaattttagaactgcgacctggccagcacctg
acgctgacgccgcaactgcaacaatccattcgattgttgcagctgtctacgctcgacctt
gaggcggagatctcgcaagtcctcgcggacaatcccctgcttgaacgggacgacgagacc
cccgccgcagaagcgcaagcggaatccgaacgcgaatcctcggtgcaggatgacgaaccc
gccgccgagcgcgagtctccggttgacgagatgccggggtcgggcggggtgtattccgat
gatgattccagcctgcccgaggcggcccgcccagacacattgcgtgaatatctgcttggc
cagctggttctgacccgggcagcgccccgagacgccgcgctggcgtccttgctgatcgat
gagctggacgaaaacggctacctcggttcgcctttggacgaaatattgagctggctgccc
gccgaactggagccggacatcgatgaattgcgcgcggctttgtcgctgctgcaatcattt
gatcccgtgggtatcggcgctcgtgacatggccgaatgcctgctgttgcaactgcgcaac
ccagatctcacccgcttgcccgaggcggctgaccccgctgtgctggcctgcgcccgggtg
gtgtgcgcgcagcacttgcctttgctggcgacgggcaatgccgctcgcctctgtgccgcc
gtgggctgtgacgaagcgacgtggcgcgtggctcattccttgattctgcggctggaaccg
cgtccagggcgcgcctggaccgtgccagcagccgactacgcggtgccggacgtcattgtg
aggaagacccgccggggatggcaggtgacacttaacagcgctgccgtgccgcgtttgcag
atcaacgggctgtatgcgcagatgctgggcaaccagaaagagtcggcgcacgccggcctg
caatcccagttgcagcaagccaaatggatgatccgcaacgtcgagcagcgtttcgacacg
atcctgcgcgtggcgcaggccattgtggaacggcagaccgcctttttcagccaaggcccc
gtcgcaatgcgccccttgattctgaaggacattgcgggtgaactcggtatgcacgaatcg
accatttcacgcgctacaacgcagaagtacatgctcactccgtttggtacgctggagctc
aagcgcttctttggagcgggcgtatcgaccgatggcggggacgcgacgtcggccactgcg
gtgcagaccttcatccgccaaatggtggcggacgagaaccgggccaagcctttgtccgac
agccagatcatgcagaaactggctgatcaggggatagtcattgcccgccgcacggtggca
aagtaccgcgaagcgctgcggattgctccggctacgttgcgcaaggcacaggcctctgcc
cgttga

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