Achromobacter seleniivolatilans: RAS12_21060
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Entry
RAS12_21060 CDS
T09953
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
asel
Achromobacter seleniivolatilans
Pathway
asel02020
Two-component system
asel02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
asel00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RAS12_21060 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RAS12_21060 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asel03021
]
RAS12_21060 (rpoN)
Transcription machinery [BR:
asel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RAS12_21060 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
WMD19097
UniProt:
A0ABY9LZP0
LinkDB
All DBs
Position
complement(4680775..4682220)
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AA seq
481 aa
AA seq
DB search
MQNIVPMTRPILELRPGQHLTLTPQLQQSIRLLQLSTLDLEAEISQVLADNPLLERDDET
PAAEAQAESERESSVQDDEPAAERESPVDEMPGSGGVYSDDDSSLPEAARPDTLREYLLG
QLVLTRAAPRDAALASLLIDELDENGYLGSPLDEILSWLPAELEPDIDELRAALSLLQSF
DPVGIGARDMAECLLLQLRNPDLTRLPEAADPAVLACARVVCAQHLPLLATGNAARLCAA
VGCDEATWRVAHSLILRLEPRPGRAWTVPAADYAVPDVIVRKTRRGWQVTLNSAAVPRLQ
INGLYAQMLGNQKESAHAGLQSQLQQAKWMIRNVEQRFDTILRVAQAIVERQTAFFSQGP
VAMRPLILKDIAGELGMHESTISRATTQKYMLTPFGTLELKRFFGAGVSTDGGDATSATA
VQTFIRQMVADENRAKPLSDSQIMQKLADQGIVIARRTVAKYREALRIAPATLRKAQASA
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatattgtacctatgacccgtccaattttagaactgcgacctggccagcacctg
acgctgacgccgcaactgcaacaatccattcgattgttgcagctgtctacgctcgacctt
gaggcggagatctcgcaagtcctcgcggacaatcccctgcttgaacgggacgacgagacc
cccgccgcagaagcgcaagcggaatccgaacgcgaatcctcggtgcaggatgacgaaccc
gccgccgagcgcgagtctccggttgacgagatgccggggtcgggcggggtgtattccgat
gatgattccagcctgcccgaggcggcccgcccagacacattgcgtgaatatctgcttggc
cagctggttctgacccgggcagcgccccgagacgccgcgctggcgtccttgctgatcgat
gagctggacgaaaacggctacctcggttcgcctttggacgaaatattgagctggctgccc
gccgaactggagccggacatcgatgaattgcgcgcggctttgtcgctgctgcaatcattt
gatcccgtgggtatcggcgctcgtgacatggccgaatgcctgctgttgcaactgcgcaac
ccagatctcacccgcttgcccgaggcggctgaccccgctgtgctggcctgcgcccgggtg
gtgtgcgcgcagcacttgcctttgctggcgacgggcaatgccgctcgcctctgtgccgcc
gtgggctgtgacgaagcgacgtggcgcgtggctcattccttgattctgcggctggaaccg
cgtccagggcgcgcctggaccgtgccagcagccgactacgcggtgccggacgtcattgtg
aggaagacccgccggggatggcaggtgacacttaacagcgctgccgtgccgcgtttgcag
atcaacgggctgtatgcgcagatgctgggcaaccagaaagagtcggcgcacgccggcctg
caatcccagttgcagcaagccaaatggatgatccgcaacgtcgagcagcgtttcgacacg
atcctgcgcgtggcgcaggccattgtggaacggcagaccgcctttttcagccaaggcccc
gtcgcaatgcgccccttgattctgaaggacattgcgggtgaactcggtatgcacgaatcg
accatttcacgcgctacaacgcagaagtacatgctcactccgtttggtacgctggagctc
aagcgcttctttggagcgggcgtatcgaccgatggcggggacgcgacgtcggccactgcg
gtgcagaccttcatccgccaaatggtggcggacgagaaccgggccaagcctttgtccgac
agccagatcatgcagaaactggctgatcaggggatagtcattgcccgccgcacggtggca
aagtaccgcgaagcgctgcggattgctccggctacgttgcgcaaggcacaggcctctgcc
cgttga
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