Achromobacter seleniivolatilans: RAS12_21720
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Entry
RAS12_21720 CDS
T09953
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
asel
Achromobacter seleniivolatilans
Brite
KEGG Orthology (KO) [BR:
asel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asel03032
]
RAS12_21720 (gyrB)
03400 DNA repair and recombination proteins [BR:
asel03400
]
RAS12_21720 (gyrB)
Enzymes [BR:
asel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RAS12_21720 (gyrB)
DNA replication proteins [BR:
asel03032
]
Prokaryotic type
DNA Topoisomerases
RAS12_21720 (gyrB)
DNA repair and recombination proteins [BR:
asel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RAS12_21720 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WMD19223
LinkDB
All DBs
Position
complement(4823653..4826100)
Genome browser
AA seq
815 aa
AA seq
DB search
MSDQQNTTPENSGYGADSIKMLKGLEAVRKRPGMYIGDTSDGTGLHHMVFEVVDNAIDEA
LAGHCDDIVVTIHTDNSISVTDNGRGIPTDIHKEDEFHRSAAEIVMTELHAGGKFDQNSY
KVSGGLHGVGVSCVNALSEWLRLTIRRNGQVHQMEFRQGARVAPLAVTGTTDMRGTEVRF
LADPVIFNNIEYHYEILSKRLRELSFLNNGVKIRLVDQRNAKEENFAFSGGVKGFVEYIN
RSKTVLHPNVFSVSTESAAGGVSVGVEVAMQWNDSYSESVLCFTNNIPQRDGGSHLTGLR
AAMTRILNKYIADNELAKKAKVETSGDDMREGLACVLSVKVPEPKFSSQTKDKLVSSEVR
PAVEEAVARTLETWLLENPNDAKSLCNKIVEAARAREAARKAREMTRRKSVLEGAGLPGK
LADCQEKDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKARFDRLIASEQ
IATLITALGTSIGPDFNVDKLRYHRLIIMTDADVDGAHIRTLLLTLLYRQMPELVQRGYV
YIAQPPLYKVKVGREERYLKDDQEEAQFMLQLALKDAEIISGGNIIRGEELTDLARQYVA
ADGVIARLSRVFDVGALSAMAEGVEINLDTAEATADSAKRLADAMRDPVNGNGVDVVPQF
DETTERHRLSVQRMHHGNVRVSIIDADFVNGADYAILSKAASSFLGKVGSRSLAARGEGD
KRKEQTVSDFREAMQWLRSEADRSISKQRYKGLGEMNPSQLWETTMDPKVRRLLRVQIED
ALAADEVFQTLMGDDVEPRRAFIERNALSAGNIDA
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcagcagaacaccactcccgagaacagcggctacggcgctgactcgatcaag
atgctcaaggggctggaggccgtgcgcaagcgccccggcatgtacatcggcgacacgtcg
gacggtaccggcttgcaccatatggtgtttgaagtcgtggataacgccatcgacgaagcc
ctggccggacattgcgacgacatcgtcgtgacgatccacaccgacaactcgatttccgtg
accgataacggccgcggtatcccgaccgatatccacaaggaagatgaattccaccgcagc
gcggcggaaatcgtcatgaccgaactgcacgccggcggcaagttcgaccaaaactcgtac
aaggtgtctggcggtttgcacggcgtgggcgtgtcttgcgtgaacgccctgtccgaatgg
ctgcgtctgaccattcgccgcaatggccaggtgcaccagatggaattccgccaaggcgcg
cgcgttgcgccgctggcggtgaccggcacgacggacatgcgcggcacggaagtgcgcttc
ctggccgacccggtcatcttcaacaacatcgaataccactacgagatcctctccaagcgc
ttgcgcgagctctcgttcctgaacaacggcgtgaagatccgcctggtggatcagcgcaac
gccaaggaagagaactttgcgttctcgggcggcgttaagggttttgttgaatacatcaac
cgcagcaagaccgtgctgcacccgaacgtgttttcggtcagcaccgaatcggccgccggt
ggcgtgtcggtgggcgttgaagtggcgatgcagtggaacgacagctacagcgaaagcgtg
ctgtgcttcaccaacaacatcccgcagcgcgatggcggttcgcacttgacgggtttgcgt
gcggccatgacccgcatcctgaacaagtacatcgccgacaacgagctggccaagaaggcc
aaggttgaaacgtcgggcgacgacatgcgcgaaggcctggcctgcgtgctgtcggtgaag
gtgcccgagcccaagttcagcagccagacgaaggacaagctggtctccagcgaagtgcgt
ccggccgttgaagaagccgtggcgcgcacgctggaaacctggctgcttgaaaatccgaac
gacgccaagtcgctgtgcaacaagatcgttgaagccgcccgtgctcgcgaagccgcgcgc
aaggctcgcgaaatgacgcgccgcaagagcgtgctggaaggcgctggcctgcccggcaag
ctggctgactgccaagagaaagacccggcgctgtgcgagctgtacatcgtcgagggtgac
tccgcaggcggctcggccaaacaaggccgcgaccgcaagttccaggccatcctgccgctg
cgcggcaaggtgttgaacgttgaaaaggcgcgctttgaccgcctgatcgccagcgaacag
atcgccaccttgatcacggcgctgggcaccagcatcggccccgatttcaacgtggacaag
ctgcgttatcaccgcttgatcatcatgactgacgcggacgttgacggcgcgcacatccgc
actttgctgctgacgctgctgtatcgtcagatgcctgaactggttcaacgcggctatgtg
tatatcgcccagccgccgctgtacaaggtgaaggttggccgtgaagagcggtatctgaag
gatgaccaggaagaagcgcagttcatgctgcaactggccctgaaggacgcggagatcatc
tcgggcggcaacatcattcgtggcgaagagctgaccgatctggcccgccagtacgttgct
gccgacggcgtcattgcccgtctgtcgcgcgtgttcgacgtgggcgcgctgtcggccatg
gccgaaggcgtggaaatcaatctggatacggccgaagccaccgcagactcggccaagcgc
ctggccgacgccatgcgtgatccggtcaacggcaatggcgtggatgtggtgccgcagttc
gacgagacgaccgaacgtcaccgcctgtccgtgcagcgcatgcaccatggcaacgtgcgc
gtcagcatcatcgatgccgacttcgtcaacggcgctgattacgccatcttgtccaaggcg
gcttccagcttcctgggcaaggtgggatcgcgttcgctggccgctcgcggtgaaggcgac
aagcgcaaggaacagacggtgtccgacttccgcgaagccatgcaatggctgcgcagcgaa
gccgatcgcagcatctcgaagcagcgctataagggtctgggcgaaatgaacccgtcccag
ctgtgggaaaccacgatggacccgaaggtgcgccgcctgttgcgcgtgcagatcgaagac
gcgctggcggctgacgaggtcttccagaccttgatgggcgacgacgtggaaccgcgccgc
gccttcatcgaaaggaatgcgctctcggcaggcaatatcgacgcctga
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