Achromobacter seleniivolatilans: RAS12_22275
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Entry
RAS12_22275 CDS
T09953
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
asel
Achromobacter seleniivolatilans
Pathway
asel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
asel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RAS12_22275 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asel03021
]
RAS12_22275 (rpoA)
03400 DNA repair and recombination proteins [BR:
asel03400
]
RAS12_22275 (rpoA)
Enzymes [BR:
asel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RAS12_22275 (rpoA)
Transcription machinery [BR:
asel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RAS12_22275 (rpoA)
DNA repair and recombination proteins [BR:
asel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RAS12_22275 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
AAA_lid_4
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
WMD19326
UniProt:
A0ABY9LX19
LinkDB
All DBs
Position
4933973..4934959
Genome browser
AA seq
328 aa
AA seq
DB search
MSTQGFLKPRSIEVEPVGTHHAKIVMEPFERGYGHTLGNALRRILLSSMTGYAPTEVQMT
GVVHEYSTIPGVREDVVDILLNLKGVVFKLHNRDEVTLVLRKTGAGTVLASDIELPHDVE
IINPGHTICNLTDAGKLEMQIKVEKGRGYVPGNVRALSEDRTHTIGRIVLDASFSPVRRV
SYAVESARVEQRTDLDKLVLDIETNGVISPEEAVRQSARILMDQISVFAALEGAGDSYEA
PVRGTPQIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLN
EIKEVLAARGLTLGMKLENWPPLGLERP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcaaggtttcctgaagccgcgctccattgaagtcgaaccggtcggcacgcac
catgccaagatcgtgatggagccgttcgagcgtggctacggtcatacgctgggcaacgcc
ctgcgccgcatcctgctgtcttcgatgaccggctacgcgccgaccgaagtccagatgacg
ggcgtggtgcacgaatactcgaccatcccgggcgttcgcgaagatgtcgtcgacatcctg
ctgaacctgaagggcgtggtcttcaagctgcacaatcgcgacgaagtgaccctggttctg
cgcaagaccggcgcgggcaccgtgctggccagcgacattgagctgccgcatgacgtcgag
atcatcaaccccggccacaccatctgcaacctgacggatgcaggcaagctggaaatgcag
atcaaggttgaaaagggccgcggctacgtgccgggcaacgtgcgcgcgctgtcggaagac
cgcacccacaccatcggccgcatcgttctggacgcttcgttcagcccggtccgccgcgtg
agctacgcggttgaaagcgcccgtgtggaacagcgtaccgacctggataagctggttctg
gacatcgaaaccaacggcgtgatctcgcccgaggaagcggtgcgccaatcggctcgcatc
ctgatggatcaaatctcggttttcgctgctctggaaggcgctggcgattcgtacgaagct
ccggtccgcggcacgccgcagatcgatccggtgctgttgcgcccggtcgacgacctggaa
ctgaccgtgcgttcggccaactgcctgaaggccgaaaacatctactacatcggcgacctg
attcagcgtaccgaaaacgagctgctcaagaccccgaacctgggtcgcaagtcgctcaac
gagatcaaggaagttctggctgcacgtggcttgacgctcggcatgaagctcgagaactgg
ccgcccctgggcctggaacgtccctaa
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integrated database retrieval system
