Achromobacter seleniivolatilans: RAS12_22705
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Entry
RAS12_22705 CDS
T09953
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
asel
Achromobacter seleniivolatilans
Pathway
asel00521
Streptomycin biosynthesis
asel00523
Polyketide sugar unit biosynthesis
asel00525
Acarbose and validamycin biosynthesis
asel00541
Biosynthesis of various nucleotide sugars
asel01100
Metabolic pathways
asel01110
Biosynthesis of secondary metabolites
asel01250
Biosynthesis of nucleotide sugars
Module
asel_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
asel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RAS12_22705 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RAS12_22705 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
RAS12_22705 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RAS12_22705 (rfbB)
00525 Acarbose and validamycin biosynthesis
RAS12_22705 (rfbB)
Enzymes [BR:
asel01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
RAS12_22705 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
WMD19406
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All DBs
Position
complement(5024515..5025585)
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AA seq
356 aa
AA seq
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MSILVTGGAGFIGSNFVLDWLAHHNEPVVTLDKLTYAGNLDNLASLQDDPRHDFVQGDIA
DQDAMLRLLQAHQPRALINFAAETHVDRSIADPGSFVQANIVGTFHLLEAARHYWTALDG
SAKTDFRFLHVSTDEVYGSLAAGDPPFTEQTCYAPNSPYSASKAASDHLVRAYHQTYGLP
VLTSNCSNNYGPLQFPEKLIPLVIHNAFAGKPLPIYGDGLQRRDWLYVGDHCDAIRRMLE
AGVPGATYNVGGWNERTNLEVVHGLCTLLDELSPRADGHSYATQIVHVTDRPGHDRRYAV
DATLLQRELGWIPAETFDSGIRKTVRWYLDHPQWVARITSGAYRQPPAGCAQAETA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtattcttgtcaccggcggtgccggcttcatcggttccaacttcgtgttggactgg
cttgcgcatcacaacgagccggtcgtcacgctggataagcttacgtatgcaggcaacctg
gacaatcttgcatccttgcaagacgatccgcgacacgattttgtccaaggcgacatcgct
gaccaagacgcgatgttgcgcctgctgcaggctcaccaaccgcgcgccctgatcaacttt
gccgccgagacccatgtcgaccgctccattgccgacccgggctcatttgtccaagccaat
attgttggcaccttccatttacttgaagcggctcgccattactggacggcgctagacggc
agcgccaaaactgatttccgctttttgcacgtctcaaccgacgaggtttacggctcgctc
gccgctggcgatccgccatttacggagcagacctgttacgcgccgaacagcccctattcg
gcaagcaaggcagccagcgatcatctggtccgcgcataccatcagacctacggtctgccg
gtattgacgtcgaattgttctaacaactacggtccgctgcaatttcccgagaaactgatt
ccgctggtgattcacaacgcattcgccggcaaaccgctgcctatctacggcgatggattg
cagcgccgcgattggctttacgtgggcgaccattgcgatgccatacgcagaatgcttgaa
gccggcgtgccaggggccacctataacgtaggcggttggaatgaaaggaccaacctggaa
gtcgtccacggcctgtgcacgctgcttgatgaactcagcccacgggcagacgggcattcc
tacgcgacgcaaatcgtccatgtcacggaccgcccgggccatgaccgccgctacgccgta
gacgccaccctgctacaacgcgaactgggatggatacccgcggagacttttgattccggc
atccggaaaacggtccgctggtatctggatcatccgcagtgggtggcgcgcataacaagc
ggcgcctatcgccagccaccagctggctgcgcacaggcagaaaccgcgtga
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