Achromobacter seleniivolatilans: RAS12_22950
Help
Entry
RAS12_22950 CDS
T09953
Name
(GenBank) hemagglutinin repeat-containing protein
KO
K15125
filamentous hemagglutinin
Organism
asel
Achromobacter seleniivolatilans
Brite
KEGG Orthology (KO) [BR:
asel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
asel00536
]
RAS12_22950
Glycosaminoglycan binding proteins [BR:
asel00536
]
Heparan sulfate / Heparin
Microbial pathogens
RAS12_22950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg_2
TPS
Fil_haemagg
Motif
Other DBs
NCBI-ProteinID:
WMD19452
LinkDB
All DBs
Position
5077697..5085529
Genome browser
AA seq
2610 aa
AA seq
DB search
MSKLRSVAIWSILITQIWTPVLAQTLPIAVDKSVAGARPIVGVSNGVPVVNIAPPSAGGV
SNNRYTQFNVGPSGVVLNNSGGGSQTQLAGQVAGNPMLGNQRAMAILNQVTAPNPSQLMG
MLEVAGNRANVIVANPAGITCNGCGFLNADRATLTTGRPVIGADGMLSFDIAAGRLGIEG
QGLYGANLSQLDLLARTLEINAQVWADRLTVVAGASRVGYDGLNVSALTGDGAAPRVALD
VAALGGMYANSIRLIGTEAGVGVNVGGNLAALTGTLQLSANGDVSIQPSGRLQAATALSV
DSKGQVSNAGTVAAGAGLDLRADGNVVNSGGMSAAGNVGINGRQLNNSGNVTAGLQADGS
ISPLGALNAQVDALLNPGTLVAGGNVNVMAGAMNLSGGKLVAGNALTLDASGNISNRGGA
VYGGSVALRAAGVDNASGKITSGGALTGNVAGAIDNRGGTVAATQAVDLRAQSFGNTAGG
VVSGDNVALQASGGINNQGGTLQANGKLDVNSAGALNNQDGNLLGGAAEIRAGSLNNQNG
VVQADGKLDVASVGVLINQGGGFYGGSADIKMASLANTGGKIVSGDALNLTATGHIGNVG
GTVAAQGLVTLNAQSLANTRGIVAGNGITLKTLGALDNSAGLIQADDVLALTAASVNNRD
TLANSASGALGLMGKQVTLNAAAVDNQAGRIGAGQDLGVTTGTLNNNSGNVSSNVNAKLA
VGNLQNTSGALTAGASLELTTGNLDNTGKIHSGQHLTINADTLTNRAGGEIIAAGNNFLN
VGGTLANAGLIDGGYTRIDAGNVTNTGRIYGDRVGIKTPTLLNDANAVIASRGDMDLGVG
SLVNREHALIYSAGDLRIGGALDVTGKAAGLAQSIVNVSATIEVAGNADIAAASIQNLNQ
HFTSEVVEVSRGPKLYYRLENSTELLDGSKLWLCDQVTALCGRDPVTFLDDDAERRLLLP
STKYPESIYGPPFDYVASRRGEAGFSAPIPLAYMPGPVAGSEGCGSGEYGKFCMLEPEVY
RYSQEARIWAIFEVAQPSGPLPEWVPLDAPCSTIASCAAEKERRDAFDLELSAFKNAHRA
LNEKIRAFNADFNSRLVANFFYYQVDEVISESRTLSTDPAKIIVGGNAKFTGAVTNDKSR
IIAGGVLSVDGPAVNNMGAEGQRTLERVGYQVRTITSGGGRKENRTDYTDVVAPERIELA
VASSTGNTAPPATGNQKPGSTAVAGALAPAKIIEIGLPGKGIVRVVTLPPVIPQSALFQV
LHRPDAPYLIATDAQFLGQRPVLSSDYLLQQLNQNPGHILKRLGDGFYEQKLVAEQVMLA
TGQRFVGDYTDNESQYKALLTAGADFAGKFGLTIGTALTEEQMLHLTSDIVWMVEQTVTL
PDGTQQTVLSPQVYLAVQPGDLRGDGTLIAGRDTRIKTAGDVTNTGTIGARNALLVEAEN
VRNTVGSMQGKTVNLAARNDIDNLAGLLKGDSVTLAAGRDINLTESTQSNASGGVSSTRV
DGVARIDAGSLNAQAGRDFNAQAAAISATADARVQAGRDINLTTAEDRYAESYDYGKKNR
AEMRSSTDVGTQIAAGGNLTLIAGQDVNAIAAQVSSDKQLAVGAGRDINVLAGDSAGYAY
NETYFKQKGFLSSKTTHLKNETELTQAVGSTFGGDSVVMMAGRDMTVVGSNVIGDNDVQI
AVGRDLQVLAAEETYRDYQYEKVKKSGMGGGGFSIGYNKQERIDWMKSASGGYTSSTIGS
AGGDLIIDAGRDVGVMGSNLLAQDGNIAITGRNVAIVAAVGDAQQHEYHEFKQSGLTIGV
AGGVLGATQQIHGTLKQAADAKDGRLAAVKVGQAAYQAVQTDRMLDAANGKDASAAQKEA
ASAQIQISVGSSKSVSETKRTQETAFGSSVMAGGNVSIIALGENGVAGTGNLSIIGSDLA
GKNVLLAATNDLMLLSQAQTSTEVSTNKNSGWKAGVGIGVSDSGSGGGINIFASGYMGSG
NANGNGTTYRETQVSARDNLTLISGRDTLLEGAQARADSIRADIGRNLTVVSQQDSDRYD
AKQKQVNAGGSFSFGSMTGSAYIGASMGKTKSNYDSVIEQTGLYAGSGGFDIYVGKHTQL
DGAVIASDADAAKNLLSTETFGYTDLKNKADYKSTTVGINLGMSGAFDVANKGKALGSGP
SGLSFGSTSGSESGTTHAAVAEGTIEVRADKETGHDSLAGLSRDTAGANGSIGKIFDKDK
VREQLEFQQAFGQLGMQIAGDITKKLAKDNPDVWGEGKPGKIAVHSIVAAAGAALGGGDV
AGAIAGTVAGNLISSTMKDAIDEAMSNLPASIQREAANVVLNALSGAVGGLVGGGSGAGG
ALSADMFNRQLHPDEKVLANRIAADAKARGVDVTAEQIEAQMRRMDAVLPNGEMYVGVPD
VLYGEGGITDDGAIFKKVGQTQDGQTIYMDFPVAGDARLQSLIVSYTSGLEVPTGYFYTP
ESNRENYWANFGSPSSAVKAPSAMSRHCVTGECAAYMMRFATAADYQDLRNSNADVLAKL
ATANGRFGAITGTLGLAPGPYSAPFLAASKGAAISGWLLGGLEQAIRPNAAAYWKGGAID
TAVTVVSSAAPNGAILFNEIGEYLKVKYAK
NT seq
7833 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcttcgctctgttgccatctggtccattctgattactcaaatctggacaccc
gttctggcgcagaccctgcctatcgctgtcgacaagagtgtggctggcgcccggccgatc
gtcggcgtgagcaatggcgtgcccgtggtgaatattgcgccgccatctgcgggtggagtg
tcgaacaaccggtatacgcagttcaacgtgggtccgtccggcgtcgtgctgaataacagc
ggtgggggcagccagacacaactggccggtcaggtcgcgggcaatccgatgctgggcaat
cagcgcgcaatggccatcttgaaccaggtcacggcgcccaacccctcacaactgatgggc
atgctggaagtcgccggcaaccgcgccaatgtcatcgttgccaacccggcgggtattacc
tgcaacggttgcggatttctgaatgcggaccgggcaacgctgaccaccgggcgtcccgtc
atcggcgcggatggcatgttgagcttcgacattgcagcggggcggcttggcatcgaaggc
caggggctgtacggcgccaatctaagccaattggatctgctggccagaacgctggaaatc
aacgcccaggtctgggccgaccgtctgaccgtggtcgctggcgcgtcgcgggtgggttac
gacggtctcaacgtgtcggcgttgaccggcgatggcgccgcacctcgtgtagcgctggat
gtggccgcattgggcggcatgtacgccaacagcatccggttgatcggaaccgaagccggt
gtgggcgtgaacgtcggcggcaaccttgccgcgctgaccggcacgctgcaactcagcgcc
aatggcgacgtcagcatccagccgtcgggaagattgcaggcagcgactgcattgtcggtg
gacagcaaaggtcaggtcagcaatgcgggcacggtggcggctggcgccggcctggatctg
cgggcggatggcaacgtcgtcaatagtggcggcatgtccgccgcgggaaatgtgggcatc
aacgggcgtcaactgaataacagcggcaatgtcaccgctggcctgcaagccgatggctcg
atcagtccgctgggtgcgttgaacgcgcaggtggacgccttactgaaccccggcacactg
gttgcgggcggcaacgtgaatgttatggcaggcgcgatgaacctgtcgggcggcaagctt
gtagcaggcaatgcgttgacgctggacgcctcgggcaatatcagtaaccggggcggcgct
gtgtatggcggatcggtggcgctgcgcgcggccggagtggacaacgcttccggcaagatc
accagcggtggtgcgctgaccggcaatgtggcgggcgcaatcgacaatcgcggcggaacc
gtggcggccacgcaagcagtggacctgcgcgcccaatcgttcggcaatacggccggcggc
gtggtgtcgggcgacaacgttgcgttgcaagcaagcggcggcatcaataaccagggcggc
accttgcaggccaacggcaagctggatgtgaacagcgcaggcgcgctgaacaaccaggac
ggcaatctgctgggcggcgctgccgagattcgggcgggcagtctgaataatcagaacggc
gtggtgcaggcggacggcaagctggatgtcgcgagcgtcggcgtcttgatcaaccagggc
ggtggcttctacggcggctccgccgatatcaagatggccagccttgccaacaccggcgga
aaaatcgtcagcggtgatgcgctgaatctgacagccactggccacatcggcaacgttggc
ggcaccgtggccgcgcagggcttggtgacgctgaacgcgcaatcgctggccaacacgcgt
ggcatcgtggcaggcaatgggatcacgctaaagacactgggggcattggataacagcgca
gggctgatccaggccgacgatgtgctggccttgacggccgcgagcgtcaacaaccgcgac
acgctcgccaacagcgccagcggcgcgctgggtttgatgggcaagcaggtcacgctgaac
gctgcggcagtggacaaccaggcgggcaggataggcgctggacaagacttgggcgtcacc
actggcacgctgaataacaacagcggcaacgtctcgtccaacgtcaatgcaaaactcgct
gtgggcaatctgcagaacacgtcgggcgcgttgacggcgggcgcatctcttgaactgacg
acgggcaatctggacaacacgggcaagatccattcgggccagcacctgacgatcaacgcc
gacacgctgaccaaccgtgctggcggagaaattattgcggcggggaacaatttcctgaac
gtgggcggaacccttgccaatgcgggcctgatcgatggcggctatacgcgcatcgatgcc
ggcaacgttaccaatacgggccgcatctatggcgaccgcgtcggtataaaaacgcccacg
ctgctgaacgacgccaatgccgtcatcgcatctcgaggcgatatggacctgggcgtgggt
tcattggtcaatcgcgaacacgcgctgatctactcggcaggagatttgcggattggcggc
gcgttggatgttactggcaaggctgcgggcttggcgcaatcgattgtcaatgtctcggcc
acgatcgaagttgcaggcaacgccgatattgccgcagcatctatccagaacttgaatcag
cacttcacaagtgaagtcgtcgaggtcagccgcggccccaagctgtactaccgtctggaa
aactccaccgagctgttggatgggtccaagctgtggttgtgcgatcaggtgacggcgctt
tgcggccgtgatccggtaacgtttctggacgacgacgcagagcgccgtttgctgctgccg
tccacgaagtatccggaatcgatctacgggccgccgtttgactatgttgccagcaggcga
ggcgaggccggcttcagcgcgccgattccgctggcatacatgcccggcccggtcgccggg
tccgagggttgcggcagtggtgaatacggcaagttttgcatgcttgagccggaagtctac
cgctactcgcaggaggctcggatatgggcaattttcgaagtggcccagccgtctggccca
cttccggaatgggtgcctttggacgcgccatgctcgacgattgcaagctgcgcagccgag
aaagagcgacgtgatgcgttcgatctggaactgagcgcctttaagaatgcgcaccgcgcg
ttgaatgaaaaaattcgcgccttcaacgccgatttcaatagccgtcttgttgccaacttc
ttctactaccaagtggatgaagtcatctcggaaagccgcacgctatcgaccgatcctgcc
aagatcatcgtaggcggcaatgccaaattcacaggtgctgttaccaacgacaagagccgc
atcatcgcgggcggggtgctgtccgtcgatggacctgccgtcaataacatgggcgcggaa
ggccagcgcaccttagagcgcgtaggctatcaagttcgcaccatcacgagtggcggcggg
cgcaaagaaaaccggacagactacaccgacgtcgttgcacctgaacgtatcgaactcgcg
gtagccagctccacgggtaacaccgccccgcccgcgaccggaaatcaaaaacccggctct
accgccgtggcaggggcgctggcaccggccaaaatcatcgaaatcggcctgcccggcaaa
ggcattgtgcgcgtggtgacgctgccgcccgtcatcccgcaaagcgccttgttccaggtg
ctgcaccgtcccgatgcgccttacctgatcgccaccgatgcgcagttcctgggccagcgc
ccggtcctgtccagtgactacctgctgcaacaactgaaccagaacccgggccatatcctc
aagcgcctgggcgatggtttctatgaacagaagctggtggccgaacaagtcatgctcgcc
actggtcaacgctttgtgggcgactacaccgacaacgaatcgcaatacaaagcgctgctg
accgcaggagcggactttgccggcaagtttggcctgaccatcggcacagccctgaccgaa
gagcagatgctccacctgaccagcgacatcgtctggatggtggagcagaccgtcaccttg
cccgacggcacgcagcaaaccgtgttgtcgccccaggtctacctggcggtgcaacccggc
gatttacgcggcgacggcacgctgattgcaggccgtgacacgcgtatcaagacggcaggc
gacgtcaccaacacgggaaccatcggcgcccgcaatgcgctgctggtcgaagcggagaac
gtccgcaacaccgtcggttccatgcagggcaagaccgtcaatcttgccgcccgcaacgac
atcgacaacctggccgggctgctcaagggagactccgtcacgctggccgctggccgcgac
atcaacctgactgaatccacgcaatccaacgcgagtggtggcgtgagcagcacccgtgtc
gacggtgtggcacgcattgatgcgggtagcctgaacgcacaggccggccgcgacttcaac
gcccaggccgccgcaatcagcgccaccgcagacgcgcgcgttcaagcgggcagggatatc
aacctgaccacagcagaggaccgctacgcggagtcttacgactatgggaagaagaatcgg
gcagagatgcgctcgtcgactgatgtcggcacacagatcgccgcaggcggaaacctgacg
ctgatcgcgggccaggatgtgaacgcgattgcggcgcaggtgtcgtccgacaagcaactg
gcagtgggcgcgggccgggatatcaatgtgctggcaggggactcggctgggtatgcgtat
aacgaaacgtatttcaagcaaaaggggttcttgtctagcaagacgacgcacctgaagaat
gaaaccgaattgactcaggctgttgggtcaacgtttggtggcgattccgtagtcatgatg
gccggacgtgacatgacggtggtgggttcaaacgttatcggcgataacgatgtgcagatc
gcggttggcagagaccttcaggttttggcagccgaagaaacctaccgggactatcagtac
gagaaggtgaagaagtctggcatgggcggaggcggcttcagcattggctacaacaagcag
gaacgcatcgattggatgaagagtgcaagtggtggctacaccagcagcacgattggaagc
gcgggcggggatctgatcatcgacgcaggtcgagacgttggcgtcatgggcagcaatctg
ttggcgcaggacggcaatattgccatcactggccgcaatgtcgccatcgtggcagcggtg
ggcgacgcgcagcagcacgagtatcacgagttcaagcagtcgggcctgacgattggcgtc
gccggtggggtgctgggcgcaacccagcagattcatggcacgttgaagcaagccgccgat
gccaaggacggccgcctggctgccgtcaaggtggggcaagcggcgtaccaggccgtacaa
accgaccgcatgcttgatgcggccaatggcaaggacgcgtctgcggctcaaaaagaagcc
gcaagcgcccagattcagatcagcgttgggtccagcaaatctgtgagcgaaaccaagcgg
acgcaagagacggcgtttggttcttcagtaatggcgggcggcaacgtgtctatcatcgcg
ctcggtgaaaacggcgtggcaggcaccggcaacctttccattatcggaagcgatcttgca
ggcaagaacgttttgctggcggccactaacgatctgatgctattgagccaggctcagacc
tcaaccgaagtctccaccaataagaacagcggatggaaggcgggtgtgggtattggcgtc
tccgacagcggtagtggcggcggcatcaatattttcgccagcggttacatgggcagcggc
aatgcgaatggcaacggcacgacctaccgcgaaactcaagtcagcgcccgcgacaatctg
acgctgatctctgggcgcgataccttgctggaaggcgctcaagcccgcgccgatagcatt
cgcgctgatattggacggaacctcacggttgtcagccaacaagattcagaccgttacgac
gccaagcaaaagcaggtaaacgcaggcggcagtttcagcttcggttccatgactggcagc
gcctacatcggcgcgagcatgggcaaaaccaagtccaactatgacagcgtgatcgaacag
accggcctatacgcgggatcgggcggctttgatatctacgtaggcaagcacacgcagttg
gatggtgcagtaatcgccagcgacgctgacgcagccaaaaacttgctgtccaccgaaacg
tttggctataccgatttgaagaacaaagccgactacaagtccaccacggttggaatcaac
ctgggtatgtcaggggcgttcgatgtcgccaataagggcaaggccctgggatcggggccg
tctggattgagcttcggctcgacgagtggcagtgagtcgggcacaacgcatgcggcagtc
gcggaaggcacgattgaagtgcgcgcggacaaggaaacgggacacgacagtctggcgggg
ttgagcagggatacggcgggcgccaacggcagcattgggaagatttttgacaaggacaag
gtccgcgaacaactggagtttcagcaggcgtttggtcagctggggatgcagattgcgggg
gacatcaccaagaagctggcgaaagacaatcctgatgtctggggcgaaggcaaacccgga
aaaatcgccgtacattcaatcgtcgctgccgcaggggcagcattgggcggtggggacgtg
gcgggagcaattgccggaactgtcgcggggaatttgatatccagcacaatgaaagacgca
attgatgaggcgatgagcaatctaccggcctctattcaacgagaggcggccaatgtggtt
ttgaatgcgctgtcgggtgccgtgggagggctggtaggcggtggaagcggtgcggggggc
gccttgtcagcagacatgtttaatcggcagctgcatccggatgagaaagtcttggcgaat
cgcattgctgcggacgccaaggcacgaggcgttgacgtaactgctgagcagatcgaggcc
caaatgcgccgaatggatgcggtgttgccaaatggcgagatgtatgtgggagttcctgac
gtcctatatggagagggcggaattacagatgatggcgcaattttcaagaaagttgggcag
actcaagatggtcaaactatctatatggatttccccgtcgcaggtgatgctcgcctacag
agcctaattgtgtcgtacacaagcggattggaggtgccaacagggtatttttatactccc
gaatctaatcgggaaaattactgggcaaattttggttcgccaagctctgcggtgaaggct
ccttcagccatgtctcgtcattgcgttactggggaatgcgcagcctatatgatgaggttc
gcgaccgcggcagactatcaggatctacgcaattctaatgccgacgtcctcgctaagtta
gccacagccaatggtcgctttggtgcaataactgggacgttaggtcttgctcctggaccg
tattccgcgccatttctagctgcttccaaaggggcggcgattagcggatggctgcttgga
ggtctggagcaggctataaggcctaatgccgcggcctattggaaggggggggccatagac
acagctgtaacggtcgtaagtagtgctgctccgaacggggcaatactatttaatgaaatt
ggtgaatatctgaaggtgaagtatgcgaagtga
DBGET
integrated database retrieval system
