Achromobacter seleniivolatilans: RAS12_23780
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Entry
RAS12_23780 CDS
T09953
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
asel
Achromobacter seleniivolatilans
Brite
KEGG Orthology (KO) [BR:
asel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asel03000
]
RAS12_23780
Transcription factors [BR:
asel03000
]
Prokaryotic type
Helix-turn-helix
Other families
RAS12_23780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
AAA_2
HTH_30
Mg_chelatase
AAA_3
HTH_29
AAA
HTH_28
AAA_16
HTH_23
P22_Cro
HTH_IclR
HTH_Tnp_ISL3
HTH_50
TsaE
HTH_1
Motif
Other DBs
NCBI-ProteinID:
WMD19611
LinkDB
All DBs
Position
5256184..5258085
Genome browser
AA seq
633 aa
AA seq
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MATHSRQHALTQARLLFNQQGAVPGGVVAEPILRSWRRCADLGFDMRGVRRAELMTQGEL
REAQQRNEALRRLSEPAMSYLRRQAGGSGNLVILSDAQGLVLDSDGDTGFAHRASRVALM
PGAPWDEAAAGTNAIGTALVEGRATTVHGAEHYFEPNRILTCAAVPITDSEGRTLGVLDL
SSQARDVRPDVLEQVRAAVDVIEHRLFEEAYEHHAVLRLHGDHSGLGAPGEGLLAFQGDV
LIGANRRALHALGLAATALGVYRYADVFEGELERCPDAAGRVQTRAGTTYHARLRWPRSR
PPKSPVTPALPAVDAPRLPGGMRTPSFDAATLGALARAVHLSDAGVSILLQGETGVGKEV
FARQLHERSKRATGPFVAVNCAALPESLIESELFGYEEGAFTGARRQGSKGLLRQAHGGV
LFLDEIGDMPLTLQSRLLRVLQTREVSPLGAARPVLVDFALVCATHRPLAHEGADAPVRP
DLYFRIAEYTVTLEPLRTRADRLELLRGLWAAQGAGPVLPPTIEAILARYPWPGNYRQLA
AVLRTLHVLAGPSGMVDMDMLPAELSPAGSRDAAAGSPLLSSEPSNLQSMTDAAIRDALA
SHEGNVSRAARALGVHRSTIYRRAAALGLLRLR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggccacacattcccgtcagcacgcgctgacgcaagcgcgcctgctgttcaaccagcag
ggcgccgtgcccggcggcgtggttgccgagcccatcctgagatcctggcggcgttgcgcc
gacctgggctttgatatgcgcggcgtgcgccgcgctgaacttatgacgcagggtgagctg
cgtgaagcccagcagcgcaatgaagcgctgcgccgcttgtccgaacctgcgatgtcctat
ttgcgccgccaagcgggcggcagcggcaacctggtgattttgtccgacgcgcaaggattg
gtcctggacagcgacggagataccggttttgcgcatcgtgcctcacgcgtggcgctgatg
cccggcgcaccctgggacgaggccgcggccggcaccaatgccatcggcacggcgctggtc
gaaggccgcgctactaccgtccatggcgccgaacactatttcgaacccaaccgcattctg
acgtgcgcagcggtgcccattaccgatagcgaagggcgcacgctgggcgtgctggacttg
tccagtcaagcgcgcgacgtacgcccggatgtgcttgagcaagtgcgcgcggcggtcgat
gtgattgaacaccgtttgtttgaagaggcctacgagcatcacgcggtgctgcgtctgcat
ggagaccattccggactgggcgcgccgggcgaaggcttgttggcgtttcaaggtgatgtt
ctgatcggcgcgaaccggcgcgccctgcatgcgctggggctggccgccaccgcgctgggg
gtgtaccgctacgccgatgtctttgagggcgagcttgaacgctgcccggacgccgcgggc
cgggtgcagacgcgcgcgggcacgacgtatcacgcgcgtttgcgttggccgcgctcacgg
ccgccgaaatcacctgtgacgccggcgttgccagcggttgatgctccgcgcctgccgggc
ggcatgcgcacaccgagttttgatgcggccaccttgggagcgttggcgcgcgccgtgcat
ctgtcagacgcgggcgtgtcgatattgctgcaaggcgaaaccggcgtgggcaaggaagtg
tttgcacgccaactgcatgagcgcagcaagcgggcaaccgggccgttcgtggcggttaat
tgcgcggcgctgcccgaaagcctgatcgaatccgaattgtttgggtacgaagagggcgcc
tttaccggcgcgcgccgccagggaagcaagggcctgttgcgccaggcgcatggcggggtg
ttgtttctggatgaaatcggcgacatgccgctgacactgcaatcacggttgttgcgcgtg
ctgcaaacccgcgaggtttcgccgctgggtgcggcgcggcccgtcttggtggattttgcg
ctggtctgcgcaacccaccgtccgttggcccacgaaggcgcggatgcgccggtgcgtcct
gatctgtatttccgcatcgccgaatacaccgtcacgcttgagcccttgcgcacgcgtgcg
gaccggctggaactgctgcgcggcttgtgggccgcgcaaggcgcgggcccggtcttgccg
ccaaccatcgaagctatcctggcccgctatccgtggcccggcaattaccggcaactggct
gcggtgttgcgtacgctgcatgtattggcaggcccatcgggcatggtcgatatggacatg
ctgcctgccgagctgtcgccagcaggctcgcgcgacgcggcggctggctcgccgctattg
agcagcgagccgtccaatctgcaatcgatgacagacgccgcgatccgcgacgcgctggcc
tcgcatgaaggcaatgtcagccgcgcggcgcgggcgctgggtgtgcaccgcagcaccatc
taccggcgcgcggccgcgctgggcctgctgcgtttgcgttag
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