Alkalimarinus sediminis: NNL22_02810
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Entry
NNL22_02810 CDS
T08621
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
asem
Alkalimarinus sediminis
Brite
KEGG Orthology (KO) [BR:
asem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asem03009
]
NNL22_02810 (rlmD)
Enzymes [BR:
asem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NNL22_02810 (rlmD)
Ribosome biogenesis [BR:
asem03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NNL22_02810 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Cons_hypoth95
PCMT
TRAM
TRM5-TYW2_MTfase
MTS
Methyltrans_SAM
RrnaAD
Methyltransf_11
Methyltransf_15
Methyltr_RsmB-F
Methyltransf_12
DOT1
Ubie_methyltran
Methyltransf_4
Methyltransf_23
UPF0020
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
UZW75544
UniProt:
A0A9E8KQ88
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All DBs
Position
607731..609068
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AA seq
445 aa
AA seq
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MARRPQHKKKKLPAGLIELTIDSLTHDGRGVARREGKTQFVEGALVGETVRARYTDTRSK
FDELTAVDILTPSEDRITPPCPHAALCGGCSLQYIDTEAQIRFKQSVLQGQFRHFGEITT
ATLLDPMTGPSVGYRRKARLGVRYVGKRDEMLLGFREKRSGSITDINSCLVMDDRIAQHI
DELRSVIRSLSVFRAVTHVEIAAGDTEVALVFRHTSPLKSDDIEKLIQFGESHQFHIYLQ
PNDADSTHRIYPATGAERLTYRLDEFDLNLKFHPLDFTQVNADINNQMVSRAIEWLQVSS
EDRVLDLFCGLGNFTLPLARKAREVIGIEGADAMVVRGRENAEHNNLKNVAFYGADLQAD
FTQAVWAKEGFDKILIDPPRSGALDMVRYLPKFGAKKIVYVSCNPATLARDAGVLVEHGY
RMVKAGVMDMFPHTTHVESIALFEK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaagacctcagcataaaaagaagaaactaccggcgggtttgatagagttaacg
attgattcgctaacccacgatgggcgaggggttgctcgtcgtgagggtaaaactcaattt
gtagaaggcgcgttagtgggtgaaaccgtgcgtgcccgttatacggatacacgtagtaaa
tttgatgagttaaccgccgtagatatactcactccttctgaagatcgaatcacgcctcct
tgtcctcatgccgcgctctgtggtggttgcagcttgcaatatatcgataccgaggcgcaa
atacgctttaaacaatcggttttgcaaggccagtttcgccattttggtgaaatcactaca
gcaacattacttgacccaatgaccggaccatcggtcgggtatcgtcgcaaggcgcgccta
ggggttcgatatgtgggtaagcgagacgaaatgctgttagggtttcgtgaaaagcgaagc
ggctctattaccgatattaatagctgtttggtgatggatgatcgtattgctcaacatatt
gatgaattgcgttcagtcattcgcagtctgagtgtctttcgggcggttacccatgtagaa
attgcggcaggtgatacagaggttgctcttgtttttcgtcatacgtcacccttaaagagc
gatgatattgaaaagcttattcaatttggtgagtcgcaccagtttcatatttatcttcag
cccaatgacgctgattcaacccatcgtatttatcctgcgacgggagcagaacgactaact
tatcggttggatgaatttgatttaaacctaaaattccatccgttagatttcacccaagtt
aatgccgatatcaacaaccagatggtaagtagagccatcgagtggttgcaggtgtcatca
gaagatcgcgtgctggatctgttttgtggtttaggcaatttcacgttaccccttgccaga
aaggcacgagaagtgatcggcatagaaggtgccgatgcaatggtcgtgcgagggcgtgag
aatgcagagcacaataatctgaagaacgtagcattctacggtgctgatttacaggcggac
tttactcaggcagtgtgggcaaaagaggggtttgataaaatattaattgatccacctcgc
tcaggcgcattagacatggttcgatacttgcctaagtttggtgccaagaaaattgtatat
gtctcatgtaaccccgcaacattagcgcgggatgcaggtgtgctggtcgagcatggttac
cgtatggttaaagcgggtgttatggatatgtttccgcataccacgcatgtagaatcaatt
gcactgtttgaaaaataa
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