Alkalimarinus sediminis: NNL22_04870
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Entry
NNL22_04870 CDS
T08621
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
asem
Alkalimarinus sediminis
Pathway
asem00071
Fatty acid degradation
asem00280
Valine, leucine and isoleucine degradation
asem00310
Lysine degradation
asem00362
Benzoate degradation
asem00380
Tryptophan metabolism
asem00410
beta-Alanine metabolism
asem00640
Propanoate metabolism
asem00650
Butanoate metabolism
asem00907
Pinene, camphor and geraniol degradation
asem00930
Caprolactam degradation
asem01100
Metabolic pathways
asem01110
Biosynthesis of secondary metabolites
asem01120
Microbial metabolism in diverse environments
asem01200
Carbon metabolism
asem01212
Fatty acid metabolism
Module
asem_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
asem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NNL22_04870 (fadB)
00650 Butanoate metabolism
NNL22_04870 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
NNL22_04870 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NNL22_04870 (fadB)
00310 Lysine degradation
NNL22_04870 (fadB)
00380 Tryptophan metabolism
NNL22_04870 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NNL22_04870 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NNL22_04870 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NNL22_04870 (fadB)
00930 Caprolactam degradation
NNL22_04870 (fadB)
Enzymes [BR:
asem01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NNL22_04870 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NNL22_04870 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NNL22_04870 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
NNL22_04870 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF4354
Motif
Other DBs
NCBI-ProteinID:
UZW75916
UniProt:
A0A9E8HN06
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All DBs
Position
1069345..1071492
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AA seq
715 aa
AA seq
DB search
MIYEGKAITVKEIEGSIAQLNFDLDGESVNKFNRLTIEELRAATDKLKSAKDIKGLVVTS
SKDCFIVGADITEFTELFAGPEEELIASNLAANSIFSDIEDLPFPTVTAINGIALGGGFE
MCLSTDYRVMSTKAKVGLPEVKLGIFPGFGGTVRLSRLIGADNAIEWICGTKEYKAEAAL
KFCAVDAVVGPDALFDAAVDLIKQANNGKVDYKARREEKTSKLKLNPLESMMVFETAKGF
VAGQAGPHYPAPVEAIKVMQKHAGMSRDKAIEVEAKGFAKMAKTSVSASLIGLFLNDQEL
KKKAKDLEPLAGEVKQAAVLGAGIMGGGVAYQSALKGTPIIMKDIAQAGIDLGLSEAKKL
LVKRVDKKRMTADKMADVLNKITPALSYGDFNSVDLVVEAVVENPKVKGIVLAEVEDQVR
EDTILTTNTSTISVNLLAKSLKRPENFCGMHFFNPVHMMPLVEVIRGEKTSEETIATTVA
YAKAMGKTPVVVNDCPGFLVNRVLFPYFGGFIGLVRDGADFQRVDKIMEKFGWPMGPAYL
LDVVGMDTGKHAGEVMADGFPDRMKYDSATAIDVMFDAGRYGQKTDKGFYQYELDRKGKQ
KKVADESVYDMLKPIVEKQEEFSDEQIIERMMIPLCIETVRCLEDGIVETPAEADMGLIF
GIGFPPFRGGALRYIDSMGVDKFCEMADKYADLGALYQPTAGMRDMAKAGKKYFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaagagatcgaaggcagcatagctcagcta
aactttgatttagacggtgagtcggttaacaaatttaatagacttacaatcgaagaactg
cgtgcggcaactgataagcttaaaagtgctaaagatattaaaggtcttgtagtaacaagt
tctaaagactgttttatcgttggtgcggatataaccgaatttacagaactatttgctggt
cctgaagaagagctgattgctagcaacttggctgcaaatagcatatttagtgatattgaa
gaccttccttttcctactgtcactgcaattaatggtattgcgttaggtggtggtttcgaa
atgtgtctttcaactgactaccgtgtaatgtcaaccaaagcaaaggttggattgccagaa
gttaagttgggtatcttccctgggttcggtggtactgttcgtttgtcgcgcttgattggt
gctgataacgcgatcgagtggatctgtggtacgaaagaatataaagctgaagctgcacta
aaattctgtgcggttgacgcagttgttggtcctgacgccctttttgatgcagcggttgat
ttaatcaagcaagcaaataatggcaaggtcgactacaaagctcgtcgcgaagagaaaact
agcaagcttaaattgaatccattagaaagcatgatggtatttgagactgctaaaggtttc
gtagcgggtcaggcaggtcctcattacccagcgccagttgaagcgatcaaggtaatgcag
aagcatgcaggtatgtctcgtgataaagcgattgaagtagaagctaaaggctttgctaaa
atggctaagacatcagtctctgcttcattgatcggtttgttcttgaacgatcaagagttg
aagaagaaggcgaaagatctagagccgttggctggtgaagttaagcaggcagccgtattg
ggtgcaggtatcatgggtggtggtgttgcttatcagtcagcacttaaaggtacacctatc
atcatgaaagatatcgctcaggcgggtatcgatctaggtcttagcgaagctaagaaactg
cttgttaagcgtgtcgacaagaagcgcatgactgcagataagatggcagatgttcttaac
aagattactccagcacttagctatggcgacttcaatagtgttgatcttgttgttgaggct
gttgttgaaaaccctaaagttaagggtatcgtactagctgaagttgaagatcaggttcgt
gaagatacaattctgacaactaacacttcaacaatctctgttaacttgttggctaagagc
ctcaagcgtccagaaaacttctgtggtatgcacttcttcaaccctgtacacatgatgcct
ctagtagaggttattcgtggtgagaagactagcgaagagactattgctactactgttgca
tacgcaaaagcaatgggtaaaacacctgttgttgttaacgattgcccaggcttcttggta
aaccgtgtattgttcccatattttggtgggtttattggtcttgttcgcgatggtgcagac
ttccagcgtgttgataagattatggagaagttcggttggcctatgggtcctgcttacttg
ctagacgtagtaggtatggatactggtaagcatgctggcgaagtaatggcagatggcttc
cctgatcgtatgaagtatgacagtgcaacggctatcgacgtaatgtttgatgccggtcgt
tacggtcagaaaactgataaaggtttctatcagtatgagctagatcgtaaaggcaaacag
aagaaagttgctgatgagtctgtatacgacatgcttaagcctatcgttgagaagcaagaa
gagttctctgatgagcagatcattgagcgtatgatgattccattgtgcatcgaaactgtt
cgctgtctagaagatggtatcgttgagactccagcagaagctgatatgggtctgatcttc
ggtatcggtttccctccattccgtggtggggcacttcgctatatcgattcaatgggtgtg
gataagttctgtgaaatggcagacaagtatgcagaccttggtgctctatatcagcctacg
gcgggtatgagagatatggctaaagctggcaagaagtatttcggttaa
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