Alkalimarinus sediminis: NNL22_05050
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Entry
NNL22_05050 CDS
T08621
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
asem
Alkalimarinus sediminis
Brite
KEGG Orthology (KO) [BR:
asem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asem03400
]
NNL22_05050 (phrB)
Enzymes [BR:
asem01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NNL22_05050 (phrB)
DNA repair and recombination proteins [BR:
asem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NNL22_05050 (phrB)
Prokaryotic type
NNL22_05050 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UZW75951
UniProt:
A0A9E8KKB7
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All DBs
Position
1115490..1116938
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AA seq
482 aa
AA seq
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MHNIVWFRSDLRVYDNPALSAAMQSGSVVAVYLLAQNQWHQHSLSPAKRALIVAQIKTLS
AQLDKLNVPLKVIAADGFNDFPDILSEQALKLGASRIYCNIEYELNEKRCAQAVSTQLKT
VNVELVEFHDSCMIQPGQVRTKQGECYKVYSAFKREFIEQYGRFARPILNRPTQQSATGL
ASDLTVLEEVAVEHKWLELWPAGEDEAHDRLNTFVEGHIKEYDKKRDIPSIEGTSQISPY
LAIGALSTTQCMHAALSLTEGRFDSGRSGVLVWINELIWREFYRHLLDEYPRLSMHKPFK
LDTDRLPWKYDQALFNAWAEGRTGYPIVDAAMRQLSQTGWMHNRLRMITAMFLTKHLFID
WRLGEKYFMEQLVDGDLAANNGGWQWSASTGVDAVPYFRIFNPTRQSQRFDPNGDFIRRY
LPELAALDSKSIHQPSAQQAKKAGYALPIVDHATAVAQTKLWFKQLSEPTVDLFSEGELH
IA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcataacattgtttggtttagaagtgacttaagagtatatgacaaccctgcattgagt
gctgctatgcaaagcggtagcgtcgtagccgtttacttactagcgcaaaatcaatggcat
caacacagcttgtcgccagccaagcgagcgttaattgtagcgcagataaagacgctatct
gctcagctcgataaactcaatgtgcccttgaaagtgattgcagcagacgggtttaacgat
tttccagatattttaagtgaacaggccctaaagttaggcgcttcaaggatctactgtaat
atcgaatatgaactgaatgagaaacgctgtgctcaagcggtaagcacacaactaaaaaca
gttaatgtagagttggtggaattccacgacagctgcatgatacagcctggccaggttagg
accaagcagggagagtgttataaggtctactcggcgttcaaacgtgagtttattgaacag
tacgggcgttttgctcgacctatcctaaataggccgacacaacagtccgctacaggccta
gccagtgatcttactgttttagaggaggtcgctgtcgagcataaatggttagaactatgg
ccggcaggagaggacgaggctcacgatcgccttaatacgtttgtagagggccatattaaa
gagtatgacaaaaagcgggatattccatcgatagagggcactagtcagatatctccgtat
ctggcgattggtgctttaagcactacgcagtgtatgcatgcagcgttgagtttaacagaa
ggtcgttttgacagcggacgaagcggggttttggtctggataaatgagttgatatggaga
gagttctatcgtcatcttctagatgagtatcctcggttaagtatgcataagccttttaaa
cttgatactgacaggttgccatggaagtacgatcaggcgctatttaatgcttgggctgaa
ggcagaacgggctaccccatcgttgatgctgctatgaggcagctgtctcaaacaggttgg
atgcacaatagactgcgtatgataacggccatgtttttgactaagcatctctttattgat
tggcgcttgggcgaaaagtacttcatggagcaattggtcgatggagacttagctgcaaat
aatggtggatggcagtggagcgcctctaccggtgttgatgcagtaccgtactttagaatt
tttaatcctactcgacagtctcaacgctttgaccctaacggtgactttatacggcgttac
ctaccagagcttgccgcattagatagtaagtcaattcatcagcctagcgctcagcaagca
aaaaaagcgggctacgcattgccgatagttgatcatgctactgctgttgcgcagacaaaa
ctatggttcaagcaactgtcggagccgaccgttgacttgtttagtgaaggggagcttcat
atcgcatga
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