Alkalimarinus sediminis: NNL22_05590
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Entry
NNL22_05590 CDS
T08621
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
asem
Alkalimarinus sediminis
Brite
KEGG Orthology (KO) [BR:
asem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asem03016
]
NNL22_05590 (truA)
Enzymes [BR:
asem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
NNL22_05590 (truA)
Transfer RNA biogenesis [BR:
asem03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NNL22_05590 (truA)
Prokaryotic type
NNL22_05590 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF7962
Motif
Other DBs
NCBI-ProteinID:
UZW76055
UniProt:
A0A9E8KR86
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All DBs
Position
1245663..1246520
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AA seq
285 aa
AA seq
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MSSVKSDTPGTLIGSGRVALVLEYNGGRYHGWQSQKSGLPTVQQNLEIALSKVANHPVEV
VCAGRTDAGVHASHQVIHFETSALRSQRSWVMGANANLPSDISVHWVGNVDESFHARFSA
KNRRYRYVIYNNPIRPALYNKEVTWNYRPLDEKKMAFAAQCLIGEHDFSSFRAAGCQAKS
PVRTVQFLEVKRFSDFIIIDIQANAFLHHMVRNIAGVLMAIGSGTMPETWAEEVLHAKDR
SLGGVTAPPFGLYFIHVGYESGEIPMVELGPSFIKPYYVLSNSSV
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagtaaaatcagacacgcccggaaccttaattggctctgggcgtgttgcgtta
gtgcttgagtataatggcggccgttatcacggttggcaatcgcagaagtcaggcctcccc
accgttcaacaaaatctagaaatagcgctatcaaaagttgccaatcatcctgttgaggtt
gtttgtgcaggccgcactgatgctggagtacatgcgtcccatcaggtgattcattttgaa
acatcggcgttgcgttcccagcggtcatgggtgatgggtgcaaatgctaatctaccaagt
gacatttccgtacattgggttggtaatgtagacgagtcctttcatgctcggttttcagca
aaaaatcgtcgctatcgatatgtaatttataataaccccataaggcctgcactctataac
aaagaagttacctggaactaccggccgctagacgaaaagaagatggcttttgcagcacaa
tgcttgattggagagcatgatttctcatcttttcgtgcagcaggttgccaagcgaagtct
cctgtgcgtacagtacagtttctggaggttaaacgttttagtgactttatcattattgat
attcaggcaaatgcgtttcttcaccatatggtcagaaatattgcgggtgttctaatggct
ataggcagtggcaccatgcctgaaacttgggcagaagaagtgttgcatgccaaagatagg
tcgctaggcggtgtaacagcgccaccattcgggctttatttcattcatgtcggttatgaa
agtggcgagatcccaatggttgagctagggccgtcatttatcaagccttactatgtttta
tcaaactcttcagtgtaa
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