KEGG   Alkalimarinus sediminis: NNL22_06265
Entry
NNL22_06265       CDS       T08621                                 
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
asem  Alkalimarinus sediminis
Pathway
asem03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:asem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    NNL22_06265 (xthA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:asem03400]
    NNL22_06265 (xthA)
Enzymes [BR:asem01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     NNL22_06265 (xthA)
DNA repair and recombination proteins [BR:asem03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     NNL22_06265 (xthA)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos2 Exo_endo_phos_3
Other DBs
NCBI-ProteinID: UZW76179
UniProt: A0A9E8HKM4
LinkDB
Position
complement(1407281..1408093)
AA seq 270 aa
MKIVSFNVNGIRSRLHQLEALVSTYSPDIIGLQETKVHDPEFPLEQVEQLGYHVEFFGQK
GHYGVAMLSKLKPTKVIKGFPQDDEESQKRMIIGHFDLDGKELVVMNGYFPQGESRDHPT
KFPAKQKFYQDLQNLLEEQYASNQHVVVMGDLNISPEDIDIGIGPDNAKRWLRTGKCSFL
PEEREWLARLKGWGLQDSFRVLHPTEDALFSWFDYRSKGFDREPKRGLRIDQIWATPSLV
ATLSAAGIYYDIRAMEKPSDHCPIWSDFNL
NT seq 813 nt   +upstreamnt  +downstreamnt
atgaaaatagtatctttcaacgtaaacggtatccgctcaagacttcatcaacttgaagca
cttgtatcaacctactctcctgacattattgggttacaagaaacaaaagttcacgaccct
gaattccccttagagcaggtcgagcagctaggctaccatgtcgaatttttcggccagaag
gggcattacggcgttgccatgctctctaaactgaagcctacaaaagtgatcaagggcttt
cctcaagatgacgaagagtctcagaaacgaatgattattggtcactttgacctcgacggg
aaagaacttgtggtcatgaacggctacttccctcaaggcgaaagtcgcgaccatccgacc
aaattccccgctaaacaaaagttctatcaagatctgcaaaacctattagaagagcaatac
gctagcaaccaacatgtggttgtgatgggagatctcaatatctctccggaagatattgat
atcggtattgggccagataatgcaaagaggtggttgagaacaggcaaatgcagcttctta
cccgaagagcgtgagtggctagcaaggctaaaaggttgggggttgcaagatagcttccga
gtgcttcacccaacagaagacgcactgtttagctggtttgactatcgtagtaaagggttc
gatcgagaacccaaacgaggcttgcgtatcgatcaaatctgggccaccccatcactagtt
gcaacgctgagcgcggcaggtatctactacgatattcgcgcaatggaaaaaccatccgac
cactgccctatttggtctgattttaatctgtga

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