Alkalimarinus sediminis: NNL22_08820
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Entry
NNL22_08820 CDS
T08621
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
asem
Alkalimarinus sediminis
Brite
KEGG Orthology (KO) [BR:
asem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asem03032
]
NNL22_08820
03036 Chromosome and associated proteins [BR:
asem03036
]
NNL22_08820
03400 DNA repair and recombination proteins [BR:
asem03400
]
NNL22_08820
DNA replication proteins [BR:
asem03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NNL22_08820
Chromosome and associated proteins [BR:
asem03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NNL22_08820
DNA repair and recombination proteins [BR:
asem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NNL22_08820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
PTS-HPr
Motif
Other DBs
NCBI-ProteinID:
UZW76666
UniProt:
A0A9E8HPD4
LinkDB
All DBs
Position
complement(1976130..1976426)
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELVEIIASKQTQLSVKDVELAVKTIIDLMSQTLSQGQRIEIRGFGSFSLHYRAPRS
GRNPKTGESVQLSAKYVPHFKPGKELRDQVNDSLKAGY
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaattagtcgaaattattgcatcaaagcaaactcagttatctgtaaaa
gatgtcgagttagcggtaaaaactattattgatttaatgtctcaaacgctatcgcaaggt
cagcgtattgagattagagggtttggaagcttttctctgcattatcgagcgcctcggtct
ggtagaaatcctaagactggagagtccgttcagctttcagctaagtacgttcctcacttc
aaaccgggtaaagagcttagagatcaggttaatgatagcttgaaggccggttactag
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