Alkalimarinus sediminis: NNL22_08855
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Entry
NNL22_08855 CDS
T08621
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
asem
Alkalimarinus sediminis
Brite
KEGG Orthology (KO) [BR:
asem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asem03032
]
NNL22_08855 (gyrA)
03400 DNA repair and recombination proteins [BR:
asem03400
]
NNL22_08855 (gyrA)
Enzymes [BR:
asem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NNL22_08855 (gyrA)
DNA replication proteins [BR:
asem03032
]
Prokaryotic type
DNA Topoisomerases
NNL22_08855 (gyrA)
DNA repair and recombination proteins [BR:
asem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NNL22_08855 (gyrA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SIS
Motif
Other DBs
NCBI-ProteinID:
UZW76673
UniProt:
A0A9E8KQQ0
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Position
complement(1984951..1987584)
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AA seq
877 aa
AA seq
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MGELAKEILPVNIEDELKQSYLDYAMSVIIGRALPDVRDGLKPVHRRVLFAMSELNNDWN
KPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLIDGQGNFGSVDGDSAAAM
RYTEIRMEKLAHSLLADLEKETVDFVPNYDGTEQIPEVLPTRVPNLLVNGSSGIAVGMAT
NIPPHNLHEITDGCLALLDNPDMTVDDLMEYIPGPDFPTAAIINGKAGIIEAYRTGRGRI
YLRGRYEVESNAKNGKDTLVITEIPYQVNKAKLIEKIADLVKEKKIEGITELRDESNKEG
MRIVIELRRGEMPDVIMNNLYAQTQLENVFGINMVALIDGEPKTLNLKEVLAAFIKHRRE
VVTRRTVFELRKARERGHILEGLVVALSNIDPVIEMIKASPSAAIAKERLLESAWEPGNV
LAMLERAGEDACRPDDLEPQYGLRDNKYYLSPVQAQEILNMRLHRLTGLETEKLLEEYRE
ILEKIAEFLAILSDPEKLLAVIREELAAVKEEFGDERRTEITMSKRDLTVADLINEEDLV
VTISHGGYAKTQPVEAYQAQRRGGRGKSSTAMKDEDFIEKLLVANSHDTILCFTNKGKVY
WLRVFEIPQASRTARGRPMVNILPLDEGERVTTFLPIQEYKDDHFIFMATAGGTVKKTPL
ENFARPRTSGLIALGLDEGDTLIGAELTDGSKDVMLMSSAGKAIRFNENDVRAMGRTARG
VRGIKLPEGHNVVSLIIPQEDSMMLLASEYGYGKRTRIDEFPVYGRGGQGVIAMQCSERN
GKLVSAVQVFDGDEMMLISDKGTLVRSRTEEVSIVSRNTQGVRLIKLSQENELLVGVERI
DEPEPEEEFEEDGTDVENTNVASSEGGAAEATDAPEE
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagctggcaaaagaaattttacccgttaatatcgaagacgaactgaaacagtct
tatctcgattatgcgatgagcgttattatcgggcgagcattaccggatgtgcgggatggg
ttaaagcctgtgcatcgacgagtgttgttcgcgatgagcgagttaaataacgattggaat
aagccctataaaaaatcagcccgtattgttggtgatgttatcggtaagtatcacccacat
ggtgactcggcggtatatgacacaatcgtaaggatggcccagccgttctcgctcagatat
acgttgattgatggtcaagggaactttggttcggttgatggtgatagcgcagcagccatg
cgttataccgaaatccgtatggaaaaacttgctcattcattattggctgacttagaaaaa
gagacggtagactttgtacctaactacgatggcacagagcaaattcctgaagttttaccg
actcgtgtacctaacttattagtgaatggttcgtctggtattgcagtaggtatggctacc
aacatacctcctcataacctacatgaaattaccgatggatgtttggcgttattagataac
cctgacatgacggttgatgatttgatggagtatataccagggccagacttcccgacagcc
gccattataaacggtaaagccggtatcatcgaagcctatcgtaccgggcgtggacgtata
tatctgcgaggacgatacgaagtagagtctaacgccaagaatggtaaagatacccttgtc
atcactgagattccttatcaggtcaacaaagctaagctgatcgagaagattgctgacctg
gttaaagagaagaaaatagaagggattaccgagcttcgggatgagtccaacaaagaaggt
atgcgtattgttatcgaattacgtcgtggtgagatgccagatgtaattatgaataacctg
tatgcccagactcagcttgaaaacgtattcggcattaatatggtcgccctaatagatggc
gagccaaaaacactcaaccttaaagaagtattggctgcttttatcaagcaccgccgagaa
gtagtgactcgacgcactgtctttgaattgcgtaaagccagagagcgaggccacatactt
gaaggtttagttgtcgcattatctaacatagacccagttatcgaaatgattaaggcgtct
cctagtgctgcaattgcgaaagagcgtttactagagtcggcttgggagccgggtaatgtt
cttgcgatgcttgagcgcgcaggcgaagatgcatgtcgaccagatgacttagagcctcag
tatggacttcgagataataagtactatttgtctcctgtacaggcgcaagaaatattaaac
atgcgcttgcatcgcctaacgggcttagagactgagaagctacttgaagagtatcgagaa
atacttgaaaaaatcgcagagtttttagcgattttaagcgatccagaaaagcttcttgcg
gttattcgcgaagagcttgcagcggttaaagaagagtttggtgatgagcgccgcacagag
atcactatgtcaaaacgtgatcttacggttgcagacctgatcaacgaagaagaccttgtt
gttacgatttctcacggtggttatgccaaaactcaaccagtagaagcctatcaagctcag
cgtcgtggtggtcgaggtaagtcttctaccgcaatgaaagatgaagactttatagaaaag
ctgctagtggcaaactctcatgacacaatcttatgttttaccaataaaggcaaggtatat
tggttgagagtgtttgaaattcctcaggctagcagaacagctcgtggccggccaatggtt
aatattttgccgttagatgaaggtgagcgtgttaccacattcttgcctattcaggagtat
aaagatgatcactttatctttatggctactgcaggcggaacggttaagaaaacgccatta
gaaaactttgctcgcccgcgaacttctggtttgattgcactgggtttggatgaaggtgat
acgctgattggtgcagagcttaccgacggtagtaaagacgtcatgctaatgagtagtgca
ggtaaggctattcgattcaacgagaatgacgtaagagccatgggtcgaaccgcacgcggt
gttcgcggtatcaagcttccagaaggccacaatgtggtctctcttatcatccctcaggaa
gatagcatgatgctgcttgccagtgagtatggttatggtaagcgtactcgtatcgatgag
ttcccagtatatggtcgtggtggtcagggtgttatagcaatgcagtgctctgagcgaaac
ggtaagttagtctcagcggttcaggtgttcgatggcgatgagatgatgctgattagtgat
aagggaacactcgttagaagtagaactgaagaagtctctatcgtaagccgaaacactcaa
ggggttcgcttaatcaagctatctcaagagaatgagttgctggttggggtagagcgaatc
gatgagccagaacctgaagaagagtttgaagaagatggcactgatgttgaaaacactaat
gtagcaagctcagaaggtggtgctgcagaggcgacggacgcacctgaagagtaa
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