Alkalimarinus sediminis: NNL22_09195
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Entry
NNL22_09195 CDS
T08621
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
asem
Alkalimarinus sediminis
Pathway
asem02020
Two-component system
asem02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
asem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NNL22_09195
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NNL22_09195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asem03021
]
NNL22_09195
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
asem02035
]
NNL22_09195
Transcription machinery [BR:
asem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NNL22_09195
Bacterial motility proteins [BR:
asem02035
]
Flagellar system
Flagellar assembly proteins
Stator
NNL22_09195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
GerE
Motif
Other DBs
NCBI-ProteinID:
UZW76733
UniProt:
A0A9E8KQS1
LinkDB
All DBs
Position
complement(2066986..2067717)
Genome browser
AA seq
243 aa
AA seq
DB search
MALVHGQMMYSDSNIERADSLVRQHAPLVKRIAYHLMARLPASVQVDDLIQSGMMGLLEA
SKKYEPSKGASFETYAGIRIRGAMMDEIRKGDWVPRSVHRNTRKIAEAIKCIEDREGRDA
KDHEVAAELGMDLDEYYSCVKDSASGRLFSFEEILEGGDGTVDQPPEAMDNPYSELQDDA
FKEGLVKAIASLPERERLVLSLYYDQELNLKEIGAVLSVSESRVSQIHSQAALRLRSRLI
EWH
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcattggtacacggccagatgatgtatagtgactcaaatattgaacgggctgatagt
ttagttcgacagcacgcacctttggtgaagcgtatagcctatcatctgatggcaagactt
cccgctagtgtgcaggtcgatgatctcatccagtctggtatgatggggttattagaagcc
tctaagaaatatgagccatcaaaaggtgcttcattcgaaacctatgcaggtattcgaata
cggggtgctatgatggacgagattcgtaaaggggactgggttcctcggtcggttcataga
aatactcgtaaaatagcagaagcgattaagtgcattgaagaccgggaaggccgggatgca
aaagatcatgaggttgcggctgaactaggtatggacttagatgagtattactcttgtgta
aaagatagtgccagtgggaggctgtttagcttcgaagagatactggaaggtggggatgga
accgttgatcaacccccggaagctatggataatccctactcagaactacaggacgatgcg
ttcaaagaggggctggtaaaagccattgcttctctgcccgagcgagagcgcttggtactt
tcgctctactacgatcaagagcttaacctgaaggaaattggtgcagtgctttcggtaagc
gaatcaagggttagccaaatacatagtcaggcagctttacgcctaagatcccgacttatt
gagtggcattaa
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