Alkalimarinus sediminis: NNL22_09345
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Entry
NNL22_09345 CDS
T08621
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
asem
Alkalimarinus sediminis
Pathway
asem02020
Two-component system
asem02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
asem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NNL22_09345
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NNL22_09345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
asem02022
]
NNL22_09345
02035 Bacterial motility proteins [BR:
asem02035
]
NNL22_09345
Two-component system [BR:
asem02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
NNL22_09345
Bacterial motility proteins [BR:
asem02035
]
Flagellar system
Flagellar assembly proteins
Others
NNL22_09345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
FleQ
HTH_30
AAA_2
MCM
HTH_11
Mg_chelatase
HTH_24
AAA_19
AAA_3
AAA
HTH_28
MerR
PDE8A_N
Sigma70_r4_2
HTH_5
AAA_16
nSTAND3
HTH_23
HTH_3
AAA_7
DUF6946
Motif
Other DBs
NCBI-ProteinID:
UZW76762
UniProt:
A0A9E8KRZ7
LinkDB
All DBs
Position
complement(2099155..2100651)
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AA seq
498 aa
AA seq
DB search
MAKTTILIVEDDRELREALSTTLEIAGYNCVTADSAESAIPILEKKVVELVVSDVNMPGM
NGHELLEYIHRQFPGIPAMLITAYGQISDAVSAMQSGAVDYIVKPFEPSVLIESVKRVLG
SVNASKEGQPVAEDPFSRQLFQLARKVAVSDSTVMIAGESGTGKEVLARYIHSCSPRKNQ
PFIALNCAAIPENMLEAILFGHEKGAYTGAYNSAPGKFEQANGGTILLDEISEMELGLQA
KLLRVIQEREVERVGGRKTIPLDVRVLATTNRDLKEYVAEGKFREDLYYRLSVFPMQWKP
LRERQLDIVPLAERLLNDHIAKMKLPSIVFDHSAKVAMQNYDWPGNVRELDNAVQRALIL
QQGNAISASDLCLDSGSGQNFGSSSLGLSSAVGDLAQTGDRDGSAMSDYSMMASSSVAGG
NTATGEGDAVLLESDGSSVLGQDLKQREFKIIIDMLRKENGRKKQTAEKLGISPRTLRYK
MARMRECGIDLDAEMSAA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaacaacaattttaatagtagaagatgatcgagagttacgagaagctctgagc
accacgcttgaaattgctggttataactgtgtgaccgctgactcggctgaatctgccatt
ccgatattagagaaaaaggttgttgagttggtggtgagcgatgtcaatatgccgggcatg
aatggtcatgagttgttggagtatattcatcgacagtttccaggcattcctgcaatgttg
attaccgcctatggtcaaattagtgatgcggtatctgctatgcaatcaggggctgttgac
tatattgttaagcctttcgaaccaagtgtcctgatcgaatcagttaaacgagtcttaggc
tcggttaatgcctcaaaagaagggcagcctgttgctgaagatccattcagtcgtcagctc
ttccagttagccagaaaagtagcggtatctgactctactgtgatgattgcaggcgaaagc
ggcaccggtaaagaggtgttggcgcgttatattcactcttgctctcctagaaaaaaccaa
ccgtttatcgcacttaattgcgcagcaatacccgagaatatgcttgaggcgatacttttt
ggtcacgaaaagggggcttatacaggagcctacaacagtgctccagggaaattcgagcaa
gcaaatggcggcactatactgcttgatgaaatatctgaaatggagctggggttacaagcc
aaactactaagagtaatccaggaaagagaagttgagcgagtaggtggcagaaaaacaatt
cctttggacgtaagggttctggcaacgaccaaccgagacctaaaagagtatgttgctgaa
gggaagtttagggaagacttatactaccgtttaagtgtctttcctatgcagtggaagcct
ctgcgtgaaagacagctagatatagtcccgctagccgaaaggttacttaatgatcatatt
gccaaaatgaagttgccatcgattgtatttgatcatagcgctaaggtggcgatgcagaac
tatgattggcctggtaacgtgcgagagttagataatgcggttcagcgcgcgcttattctg
caacaaggaaatgctatttcagctagtgatctctgtctggactcaggttcagggcagaac
tttggtagtagttcacttgggttaagctctgctgttggcgatttagcgcagactggtgat
cgtgatggctcagcgatgagtgattattcgatgatggctagtagctcggtggcgggtggt
aacacggcgacaggtgaaggcgacgcagtactacttgaatcagatggctccagtgtttta
gggcaagatttaaaacaacgtgagttcaagattattatagacatgctccgcaaagagaat
gggcgcaaaaaacagacagcagaaaaacttggtattagccctcgtactctcagatataag
atggcgcgcatgagagagtgcggtattgaccttgatgcagagatgtctgcagcataa
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