Alkalimarinus sediminis: NNL22_11235
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Entry
NNL22_11235 CDS
T08621
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
asem
Alkalimarinus sediminis
Brite
KEGG Orthology (KO) [BR:
asem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asem03400
]
NNL22_11235
DNA repair and recombination proteins [BR:
asem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
NNL22_11235
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_22
SLFN-g3_helicase
AAA
AAA_16
T1R_D3-like
AAA_30
DUF3638
DZR
Motif
Other DBs
NCBI-ProteinID:
UZW73613
UniProt:
A0A9E8KMN8
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Position
complement(2529496..2531316)
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AA seq
606 aa
AA seq
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MAFILRNYQRDAVKATIEHFRKSDESAVIVLPTGAGKSLVIAELARLAKRKILVLAHVKE
LVEQNHAKYESYGLTASIYSAGLKQKSTAQQVTFASIQSVARNLDAFSESYSLVIIDECH
RVSGEVDENLKHSSSGDTQKDTSVNESQYLQLTRKLKSHNPGLKVLGLTATPYRMGIGWI
YRYHYHGYTRADDTRPFSHCIYELPLNYMIKNGYLTPPKVVDAAIAHYDFSSLNANSNGQ
YNEREVNELLARYPRVTQGIIEQIKMLANGEPSRQGVMIFAASINHAKEITGYLNAKETA
LITGDTPPNQRTELISRFKSRELKFLVNVAVLTTGFDAPHVDMIAILRPTESVSLYQQIV
GRGLRLSDGKTDCLVVDYAGNGFDLFYPEVGAAKPSSESVPVMVHCPKCEFANTFWGITD
DQGQLIEHYGRKCWGYELIESGERVSCDYRFRFKECRLCGAENDIAARQCARCHEAIIDP
DDQLKAALRLKNAMVIRCAGVTFEESKGRLKIIYHDEQGVELSEHFDLSHKGHCHIFNQY
FGRRFKRGTVPKKFTAIAQVIESADAFTAPDYVIARKVTGKARADIWRVKERIFDYQGAY
RKANEM
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcttttattcttcgcaattatcaacgagatgcggttaaagcaaccattgagcatttt
cgtaaaagtgacgagtctgcggtgattgtgctgccaacaggcgcgggcaaaagtctggtt
attgcggaattagcacgtttagccaaacgtaaaattttagtgctcgcgcatgtaaaagaa
ctggtcgagcaaaaccatgctaaatatgagagctacgggcttaccgccagtatctactct
gcagggttgaagcaaaagagcactgctcaacaagtcacgtttgccagcattcaatcggta
gcgcgtaatttagacgctttttcagagtcttattctcttgtcattatcgacgaatgtcat
cgcgtgagtggggaagtcgatgaaaacctaaaacatagttcgagtggtgatacccagaaa
gatacgtcagtcaatgagagccaatatctacaattaacccgtaagttaaaatctcataat
cccgggttaaaggtactcgggttgaccgcaacaccttatcgaatgggtatagggtggatt
tatcgttaccactatcatggttatactcgtgccgatgatactcgaccatttagtcattgt
atctacgagctccctctaaactacatgattaaaaatggctatttaaccccacctaaagtc
gttgatgccgccattgcacactatgatttctcaagtctcaacgcgaatagtaacggtcag
tataatgaacgtgaagtgaacgaactacttgctcgatatccgcgtgttacccaaggaatt
attgagcaaatcaaaatgctggcaaacggtgaacctagtcgccaaggggttatgattttt
gcagctagtattaatcacgcaaaagaaattacaggctatttgaatgccaaagaaacggca
ttgataaccggcgacactcctcctaatcaacgaacagaactcatatcgaggtttaagtct
cgcgaactaaaatttttggtgaatgtggcagtattgacgaccggttttgatgcaccgcat
gtggatatgatcgccatattaaggccgactgagtcagttagcctctatcagcaaatcgta
gggcggggtttaaggttgtcggatggtaaaaccgactgtcttgtggtcgattatgcaggc
aatgggtttgacttgttttatcctgaagtcggggcggcaaagccttcatctgagagcgtt
cctgttatggttcactgccccaagtgtgagtttgcaaatacattctggggcataacagat
gatcaagggcagttgatcgagcattatggccgtaaatgttgggggtacgaacttatcgag
tctggtgaaagggtatcttgtgattaccggtttcgttttaaagagtgccgtctttgtggg
gcagaaaatgatatagctgcacgccaatgcgctcgctgtcacgaggcgattatagaccct
gatgatcagttaaaagctgctctccgcctcaagaacgctatggtgatacggtgtgctggt
gttacttttgaagagagcaaagggcggctgaaaatcatttaccatgatgagcagggtgtt
gaactaagtgaacactttgatctttctcataaggggcattgccatatattcaatcagtat
tttggtcgtcggtttaagcgtgggacagtacctaagaaatttacagcgattgcgcaggtg
attgaatctgcggatgcgtttactgcaccggactatgttattgcgaggaaggtgaccggt
aaggcgagagcggatatatggcgggttaaagagcgaatttttgattatcaaggagcgtat
agaaaggcaaacgaaatgtaa
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